Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG8
Confidence20.80%DateThu Jan 5 11:26:11 GMT 2012
Rank224Aligned Residues121
% Identity17%Templatec3luaA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270.........280....... ..290.........300.........310.........320.........
Predicted Secondary structure 




















.













Query SS confidence 




































.









































Query Sequence  LDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAG. WNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSK
Query Conservation 
 


 
 
 
   


           
   
 
 
.
 

 
  
   
 
       

        
   
     
Alig confidence 










...........














.


































.......
Template Conservation 
  






 ...........      
   
   
   
  
     

  
      
 

 
       .......
Template Sequence  LDGTVLLIDYF. . . . . . . . . . . EYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIXDIAFPVEK. . . . . . .
Template Known Secondary structure 



S
...........



STTTTT



S
S
SSS.......
Template Predicted Secondary structure 





...........

















.......
Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions