Job Description P0AFG8 Confidence 98.52% Date Thu Jan 5 11:26:11 GMT 2012 Rank 89 Aligned Residues 114 % Identity 16% Template c2x7jA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis Resolution 2.35 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	S	M	G	L	G	P	I	G	A	I	Y	Q	A	K	F	L	K	Y	L	E	H	R	G	L	K	D	T	S	K	Q	T	V	Y	A	F	L	G	D	G	E	M	D	E	P	E	S	K	G	A	I	T	I	A	T	R	E	K	L	D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		A	N	G	I	D	G	V	V	S	S	A	M	G	V	C	E	G	T	.	.	.	.	.	.	.	.	.	.	.	.	K	A	P	V	T	L	V	I	G	D	L	S	F	Y	.	.	H	D	L	N	G	L	L	A	A	K	K	L	G	I	P	L	T	V	I	L	V	N	N	D	G	G	G	I	F	S	F	L	P	Q
Template Known Secondary structure		T			S	S	S													.	.	.	.	.	.	.	.	.	.	.	.	T	S													.	.		T	G	G	G	G																		S	S		G	G	G	G	G	S	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.													.	.	450	.	.	.	.	.	.	.	.	.	460	.			.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		272	.	.	.	.	.												.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	K	I	I	N	.	.	.	.	.	.	.	.	.	.	.	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L	M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	E	K	T	H	F	E	D	L	F	G	T	P	T	G	L	D	F	K	H	A	A	A	L	Y	G	G	T	Y	S	C	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	S									T	T							T							T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A	A	F	K	K	A	Q	E	T	K	G	K	A	T	V	I	L	A	H	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	D	E	F	K	T	A	Y	A	P	Q	A	D	K	P	.	G	L	H	L	I	E	I	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													S	S		.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
																											530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions