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Job DescriptionP0AFG8
Confidence98.84%DateThu Jan 5 11:26:11 GMT 2012
Rank79Aligned Residues117
% Identity21%Templatec2panF_
PDB info PDB header:lyaseChain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  PTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRL. . . . .
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Template Sequence  QAGPLGWTIPAALGVCAADP. . . . . . . . . . . KRNVVAISGDFDFQFL. IEE. LAVGAQFNIPYIHVLVNNAYLGLIRQSQ
Template Known Secondary structure  TT

TT

T...........T
T.GGG.TT



SB
G
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   417..420.........430...... ...440.........450.. ... ....460.........470.........480...
 
   266...270.........280.........290.........300.........310.........320.........330.
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Query Sequence  . . . . . . . . . . . . . . DGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDG
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Template Sequence  RAFDXDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGT


S
B




TT
STTTT



TT

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   484.....490.........500.........510.........520......
 
   332.......340.........350.........360.........370.........380 .........390.
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Query Sequence  AYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQET. . . KGKATVILAHT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KPEDIAPAFEQAKALXAQYRVPVVVEVIL
Template Known Secondary structure  ..................................SGGG
S
B
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   527..530.........540.........550.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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