Job Description P0AFG8 Confidence 32.81% Date Thu Jan 5 11:26:11 GMT 2012 Rank 158 Aligned Residues 121 % Identity 15% Template c2hbzA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (arg286->ala, glu390->ala) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk) Resolution 1.90 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L	M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	L	A	L	I	I	C	N	E	E	F	D	S	I	P	R	R	T	G	A	E	V	D	I	T	G	M	T	M	L	L	Q	N	L	G	Y	S	V	D	V	K	K	N	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	M	T	T	E	L	E	A	F	A	H	R	P	E	H	K	T	S
Template Known Secondary structure														S	S	S				T	T															T	T								S				.	.	.	.	.	.	.	.	.	.	.	.	.	.												T		G	G	G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.															.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																						.	.	.																								.	.
Query SS confidence																						.	.	.																								.	.
Query Sequence		A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	.	.	.	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A	A	F	.	.	K	K	A	Q	E	T	K	G	K	A	T	V	I	L	A	H	T	I	K	G
Query Conservation																						.	.	.																								.	.
Alig confidence																						.	.	.							.	.	.	.	.	.	.	.										.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		D	S	T	F	L	V	F	M	S	H	G	I	R	E	G	I	C	G	K	K	H	S	E	Q	V	P	D	I	L	.	.	.	.	.	.	.	.	Q	L	N	A	I	F	N	M	L	N	T	K	N	C	P	S	L	K	D	K	P	K	V	I	I	I	Q	A	C	A	G
Template Known Secondary structure		S								S				T	T					T	T			S	S	S					.	.	.	.	.	.	.	.									T	S	T	T	T		G	G	G	T	T	S								S		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions