Job Description P0AFG8 Confidence 72.80% Date Thu Jan 5 11:26:11 GMT 2012 Rank 109 Aligned Residues 65 % Identity 18% Template c2h9uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna/rna-binding protein alba 2; PDBTitle: crystal structure of the archaea specific dna binding protein Resolution 2.00 Å

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		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750			.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		E	G	S	K	G	K	V	Q	L	L	G	S	G	S	I	L	R	H	V	R	E	A	A	E	I	L	A	K	D	Y	.	.	G	V	G	S	D	V	Y	S	V	T	S	F	T	E	L	A	R	D	G	Q	D	C	E	R	W	N	M	L	H	P	L	E	T	P	R	V	P	Y	I	A	Q	V	M
Query Conservation																																.	.
Alig confidence																																.	.																			.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	T	N	Q	V	V	V	K	A	R	G	R	N	I	N	R	A	V	D	A	V	E	I	V	R	K	R	F	A	K	N	I	E	I	K	D	I	K	I	D	S	Q	E	I	E	V	Q	T	.	.	.	.	.	.	.	.	P	E	G	Q	T	R	T	R	R	V	S	S	I	E	I	C	L
Template Known Secondary structure		S	T	T										T	T																T	T	T	T																		.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions