Job Description P0AFG8 Confidence 20.20% Date Thu Jan 5 11:26:11 GMT 2012 Rank 229 Aligned Residues 115 % Identity 13% Template c1qduI_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:caspase-8 alpha-chain; PDBTitle: crystal structure of the complex of caspase-8 with the tripeptide2 ketone inhibitor zevd-dcbmk Resolution 2.80 Å

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		254	.	.	.	.	.	260	.	.	.												.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	F	V	I	N	C	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L	M	N	E	T	V	D	G	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	C	L	I	I	N	N	H	N	F	A	K	A	R	E	K	V	P	K	L	H	S	I	R	D	R	.	N	G	T	H	L	D	A	G	A	L	T	T	T	F	E	E	L	H	F	E	I	K	P	H	H	D	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S		G	G	G	T	T					.	T	T														T	T	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.			.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A	A	F	K	K	A	Q	.	.	E	T	K	G	K	A	T	V	I	L	A	H	T	I	K	G
Query Conservation																																																										.	.
Alig confidence																																																										.	.
Template Conservation
Template Sequence		V	E	Q	I	Y	E	I	L	K	I	Y	Q	L	M	D	H	S	N	M	D	C	F	I	C	C	I	L	S	H	G	D	K	G	I	I	Y	G	T	D	G	Q	E	A	P	I	Y	E	L	T	S	Q	F	T	G	L	K	C	P	S	L	A	G	K	P	K	V	F	F	I	Q	A	C	Q	G
Template Known Secondary structure															S		G	G	G		S								S				T	T					T	T	S										G	G	G	S	T	T	T		T	T	T	T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions