Job Description P0AFG8 Confidence 100.00% Date Thu Jan 5 11:26:11 GMT 2012 Rank 31 Aligned Residues 273 % Identity 15% Template c1ik6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate dehydrogenase; PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum Resolution 2.00 Å

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		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	S	T	T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	N	G	Q	Q	Y	T	P	Q	D	R	E	Q	V	A	Y	Y	K	E	D	E	K	G	Q	I	L	Q	E	G	I	N
Query Conservation
Alig confidence																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	.	.	.	D	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	G	P	E	R	V	I	D	T	P	L	N
Template Known Secondary structure																				.	.	.		T	T								T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T						S
Template Predicted Secondary structure																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																														.	.	.	.	.	.	.	.	.	50	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	A	G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L
Query Conservation
Alig confidence																.	.	.	.	.	.													.	.	.																									.	.	.	.	.	.	.					.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.													.	.	.																									.	.	.	.	.	.	.					.	.	.	.	.	.
Template Sequence		E	G	G	I	L	G	F	A	M	G	M	A	M	A	.	.	.	.	.	.	G	L	K	P	V	A	E	I	Q	F	V	L	.	.	.	G	A	D	E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	.	.	.	.	.	.	.	G	S	P	E	.	.	.	.	.	.	A	I	F	V
Template Known Secondary structure															T	.	.	.	.	.	.	T												.	.	.																									.	.	.	.	.	.	.					.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.													.	.	.																									.	.	.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.							.	.	120	.
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	N	C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T	L	N	E	N	Y	H	M	P	A	M	P	E	G	A	E	E	G	I	R	K	G	I	Y	K	L	E	T	I	E	G	S	K	G	K	V	Q	L	L	G
Query Conservation
Alig confidence																											.	.	.	.	.																																								.	.	.	.
Template Conservation																											.	.	.	.	.																																								.	.	.	.
Template Sequence		H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.	.	.	.	G	D	D	P	V	V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E	V	P	E	G	D	Y	V	V	E	I	G	K	A	R	V	A	R	E	G	.	.	.	.	D	D	V	T	L	V	T
Template Known Secondary structure		T		T	T								S														.	.	.	.	.	S	S	S								G	G	G	S	S									S	S					T	T									.	.	.	.	S	S
Template Predicted Secondary structure																											.	.	.	.	.																																								.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.
		732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	I	L	R	H	V	R	E	A	A	E	I	L	A	K	D	Y	G	V	G	S	D	V	Y	S	V	T	S	F	T	E	L	A	R	D	G	Q	D	C	E	R	W	N	M	L	H	P	L	E	T	P	R	V	P	Y	I	A	Q	V	M	N	D	A	P	A	V	A	S	T	D	Y	M	K	L	F	A	E	Q
Query Conservation
Alig confidence																	.	.	.	.																					.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																	.	.	.	.																					.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		Y	G	A	V	V	H	K	A	L	E	A	A	E	R	V	.	.	.	.	K	A	S	V	E	V	V	D	L	Q	T	L	N	P	L	D	F	D	T	V	.	.	.	.	.	.	.	.	.	L	K	S	V	S	K	T	G	R	L	I	I	A	H	D	S	P	K	T	.	.	.	G	G	L	G	A	E	V	R	A	L
Template Known Secondary structure			T	T											T	S	.	.	.	.	S	S												T	T						.	.	.	.	.	.	.	.	.																		S	T	.	.	.	T	S
Template Predicted Secondary structure																	.	.	.	.																					.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.
		812	.	.	.	.	.				.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		V	R	T	Y	V	P	.	.	.	A	D	D	Y	R	V	L	G	T	D	G	F	G	R	S	D	S	R	E	N	L	R	H	H	F	E	V	D	A	S	Y	V	V	V	A	A	L	G	E	L
Query Conservation								.	.	.
Alig confidence								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	E	K	A	L	D	R	L	T	A	P	V	I	R	L	A	G	P	D	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	R	I	I	K	A	I	E	Y	V	M
Template Known Secondary structure						S	G	G	G		S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.															300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions