Job Description P37619 Confidence 3.58% Date Thu Jan 5 11:55:55 GMT 2012 Rank 12 Aligned Residues 142 % Identity 12% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		P	L	A	R	R	I	I	F	A	V	M	I	P	A	L	L	I	S	Y	V	I	S	S	L	F	Y	M	G	S	W	Q	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	A	H	F	N	L	F	V	A	R	I	A	T	.	.	.	.	.	A	S	F	M	A	Y	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	N	K	R	L	I	T	I	S	M	L	S	A	I	A	F	V	L	T	F	I	K	F	P	I	P	F	L	P	P	Y	L	T	L	D	F	S	D	V	P	S	L	L	A	T	F	T	F	G	P	V	A	G	I	I	V	A	L	V	K	N	L	L	N	Y	L	F	S	M	G	D	P	V	G	P	F	A	N	F
Template Known Secondary structure																				T	T	T						T	T	S		S	S					G	G	G								T	T	S																				T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	I	L	D	V	H	V	F	N	R	L	R	Q	S	R	R	W	W	L	A	P	T	A	S	T	L	F	G	N	V	S	D	T	L	A	F	F	F	I	A	F	W	R	S	P	D	A	F	M	A	E	H	W	M	E	I	A	L	V	D	Y	C	F	K	V	L	I	S	I	V	F	F	L	P	M	Y	G	V
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	.	.	.	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L
Template Known Secondary structure																S	S	S		S																								T	T	T	T	.	.	.	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	M	L	L	K	R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	R	R	L	A	N	F	L	K
Template Known Secondary structure					T	T					T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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