 |
Job Description | P37619 | Confidence | 1.25% | Date | Thu Jan 5 11:55:55 GMT 2012 |
Rank | 96 | Aligned Residues | 96 |
% Identity | 13% | Template | c3hd6A_ |
PDB info |
PDB header:membrane protein, transport protein | Chain: A: PDB Molecule:ammonium transporter rh type c; |
PDBTitle: crystal structure of the human rhesus glycoprotein rhcg
|
Resolution | 2.10 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | G | A | F | S | F | P | F | I | F | L | A | T | D | L | T | V | R | I | F | G | A | P | L | A | R | R | I | I | F | A | V | M | I | P | A | L | L | I | S | Y | V | I | S | S | L | F | Y | M | G | S | W | Q | G | F | G | A | L | A | H | F | N | L | F | V | A | R | I | A | T | A | S | F | M | A | Y | A | L | G | Q |
Query Conservation |   |
  |
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
C | G | I | I | S | T | L | G | F | V | Y | L | T | P | F | L | E | S | R | L | H | I | Q | D | T | C | G | I | N | N | L | H | G | I | P | G | I | I | G | G | I | V | G | A | V | T | A | A | S | D | W | T | A | R | T | Q | G | K | F | Q | I | Y | G | L | L | V | T | L | A | M | A | L | M | G | G | I | I | V | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
  |
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | D | V | H | V | F | N | R | L | R | Q | S | R | R | W |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
I | L | R | L | P | F | W | G | Q | P | S | D | E | N | C | F |
Template Known Secondary structure |   |
 |  | T | S | T | T | S |
|
|
|
| T | T | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|