Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 41 Aligned Residues 289 % Identity 18% Template d2ozla1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		S	R	K	E	L	A	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	.	.	.	.	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																.	.	.	.	.	.	.	.	.		.							.	.						.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.		.							.	.						.	.	.
Template Sequence		K	Y	Y	R	M	M	Q	T	V	R	R	M	E	L	K	A	D	Q	L	Y	K	Q	K	I	I	R	G	F	C	H	L	C	D	G	Q	E	A	C	C	V	G	L	E	A	G	I	.	.	.	.	.	.	.	.	.	N	.	P	T	D	H	L	I	.	.	T	A	Y	R	A	.	.	.	H	G	F	T	F	T	R
Template Known Secondary structure																							T	T	S	S		S						T	T											T	S	.	.	.	.	.	.	.	.	.		.	T	T	S				.	.			S			.	.	.							T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.		.							.	.						.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80		.	.	.	.	.	.			.	.	.	90	.				.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		G	Y	D	L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	.	.	.	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D
Query Conservation																						.	.	.
Alig confidence				.																		.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	.	S	V	R	E	I	L	A	E	L	T	G	R	K	G	G	C	A	K	G	K	G	G	S	M	H	M	Y	A	K	N	F	Y	G	G	N	G	I	V	G	A	Q	V	P	L	G	A	G	I	A	L	A	C	K	Y	N	G	K	.	.	.	.	.	.	.	.	.	.	D	E	V	C	L	T	L	Y	G	D
Template Known Secondary structure		T		.										T	T		T	T	S	T	T	T	T	S	S		T	T				B	T	T	B						S	T	T	T																T		.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure				.																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	C	M	M	E	G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																						.																													.									.																			.	.	.
Template Conservation																						.																													.									.
Template Sequence		G	A	A	N	Q	G	Q	I	F	E	A	Y	N	M	A	A	L	W	K	L	.	P	C	I	F	I	C	E	N	N	R	Y	G	M	G	T	S	V	E	R	A	A	A	S	T	D	Y	Y	K	.	R	G	D	F	I	P	G	L	.	R	V	D	G	M	D	I	L	C	V	R	E	A	T	R	F	A	A	A	Y	C
Template Known Secondary structure		T	G	G	G														T	T		.										S			T	T								S				G	G	G	.	T	T	T	T	S				.				T	T
Template Predicted Secondary structure																						.																													.									.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	V	T	D	K	P	S	L	L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	.	L	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F
Query Conservation																																														.
Alig confidence																					.	.	.	.																						.
Template Conservation																					.	.	.	.
Template Sequence		R	S	G	K	G	P	I	L	M	E	L	Q	T	Y	R	Y	H	G	H	.	.	.	.	E	M	S	D	P	G	V	S	Y	R	T	R	E	E	I	Q	E	V	R	S	K	S	D	P	I	M	L	L	K	D	R	M	V	N	S	N	L	A	S	V	E	E	L	K	E	I	D	V	E	V	R	K	E	I	E	D	A
Template Known Secondary structure			T	T													S	S		S	.	.	.	.	S	T	T			S		S	S	S																									T	T	S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		312	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y	A	K	A	Y	P	Q	E	A	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	F	A	T	A	D	P	E	P	P	L	E
Template Known Secondary structure								S					G	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions