Job Description P27302 Confidence 99.40% Date Thu Jan 5 11:43:48 GMT 2012 Rank 62 Aligned Residues 163 % Identity 17% Template d2ihta3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	.	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y	D	L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E
Query Conservation																																	.
Alig confidence															.	.	.	.	.	.	.	.	.										.								.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	I	D	S	X	N	T	V	X	E	E	A	.	.	.	.	.	.	.	.	.	A	E	P	G	E	G	T	I	V	S	D	I	G	F	F	R	H	.	.	Y	G	V	L	F	A	R	A	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	G	F	L	T	S
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	S		T	T								S	S					.	.										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.										.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.																							.	.	.	.	430	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E	G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		A	G	C	S	S	F	G	Y	G	I	P	A	A	I	G	A	Q	X	A	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	P	T	F	L	I	A	G	D	G	G	F	.	.	H	S	N	S	S	D	L	E	T	I	A	R	L	N	L	P	I	V	T	V	V	V	N	N	D	T	N	G	L	I
Template Known Secondary structure		S	S	S			T	T													S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S												.	.			T	G	G	G								T											S	B
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.															.	.	.	.	.	.	460	.	.	.	.	.	.			.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		191	.	.	.	.	.	.													.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	V	E	G	W	F	.	.	.	.	.	.	.	.	.	.	.	.	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S	L	L	M	C	K	T	I	I
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																.
Template Conservation																																							.	.	.																.
Template Sequence		E	L	Y	Q	N	I	G	H	H	R	S	H	D	P	A	V	K	F	G	G	V	D	F	V	A	L	A	E	A	N	G	V	D	A	T	R	A	.	.	.	T	N	R	E	E	L	L	A	A	L	R	K	G	A	E	.	L	G	R	P	F	L	I	E	V	P	V	N	Y
Template Known Secondary structure										S	S			G	G	G	T	B													T	T							.	.	.		S													T	.	S	S	S								B
Template Predicted Secondary structure																																							.	.	.																.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.				.	.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions