Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 34 Aligned Residues 175 % Identity 19% Template d2ieaa1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.									.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	.	.	.	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	.	.	.	.	.	.	.	.	N	E	D	A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I
Query Conservation																											.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																											.	.	.														.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		E	E	Q	S	K	E	I	S	T	T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	.	.	.	.	.	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S
Template Known Secondary structure		S			S	S		B														T	T		T	T	T	G	G	G						S	S		S	G	G	G	.	.	.	.	.	T										B	B				B	T	T			B					S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.						.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		418	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure										.	.	.	.	.													.												.
Query SS confidence										.	.	.	.	.													.												.
Query Sequence		A	N	G	I	S	L	H	G	.	.	.	.	.	G	F	L	P	Y	T	S	T	F	L	M	F	.	V	E	Y	A	R	N	A	V	R	M	A	.	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	R	V	T	P	N	M	S	T
Query Conservation										.	.	.	.	.													.												.
Alig confidence										.	.	.	.	.													.												.
Template Conservation
Template Sequence		W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S
Template Known Secondary structure							T					T	S											G	G	G	S														T	T			S						S		S	T	T	T	S	T	T	T		T	T	T			S							T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.					.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	.	.	.	.	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.
Template Conservation
Template Sequence		Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T	L	N	E	N	Y	H	M	P
Template Known Secondary structure					S	S																	S	T	T												S			B
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions