Job Description P27302 Confidence 99.97% Date Thu Jan 5 11:43:48 GMT 2012 Rank 43 Aligned Residues 286 % Identity 19% Template d2bfda1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.39

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	.	.	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y	D	L	P	M	E	E	L	K
Query Conservation																										.	.
Alig confidence																										.	.											.	.	.	.	.	.	.	.	.									.	.						.	.	.										.
Template Conservation																																						.	.	.	.	.	.	.	.	.									.	.						.	.	.										.
Template Sequence		L	N	T	M	D	R	I	L	Y	E	S	Q	R	Q	G	R	I	S	F	Y	M	T	N	Y	G	E	E	G	T	H	V	G	S	A	A	A	.	.	.	.	.	.	.	.	.	L	D	N	T	D	L	V	F	.	.	G	Q	A	R	E	.	.	.	A	G	V	L	M	Y	R	D	Y	.	P	L	E	L	F	M	A
Template Known Secondary structure															T	T	S	S	S						T	T											T	.	.	.	.	.	.	.	.	.	S		T	T	S				.	.			S			.	.	.							T	T		.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.									.	.						.	.	.										.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110			.	.	.	.	.				.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.
		89	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		N	F	R	Q	L	.	.	.	.	.	.	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E	G	I
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.											.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	C	Y	G	N	I	S	D	L	G	K	G	R	Q	M	P	V	H	Y	G	C	.	K	E	R	H	F	V	T	I	S	S	P	L	A	T	Q	I	P	Q	A	V	G	A	A	Y	A	A	K	R	A	N	A	.	.	.	.	.	.	.	.	.	.	N	R	V	V	I	C	Y	F	G	E	G	A	A	S	E	G	D
Template Known Secondary structure					T		T	T		T	T	T	T		S		S	S				B	.	T	T	T	T	B					S	S	T	T	T																T		.	.	.	.	.	.	.	.	.	.										T	T	G	G	G	S
Template Predicted Secondary structure																							.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.
Predicted Secondary structure																																								.																																		.	.	.
Query SS confidence																																								.																																		.	.	.
Query Sequence		S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	.	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	.	.	.	V	T	D	K	P
Query Conservation																																								.																																		.	.	.
Alig confidence															.																									.														.																				.	.	.
Template Conservation															.																																							.
Template Sequence		A	H	A	G	F	N	F	A	A	T	L	E	C	.	P	I	I	F	F	C	R	N	N	G	Y	A	I	S	T	P	T	S	E	Q	Y	R	G	D	G	I	A	A	R	G	P	G	Y	G	I	M	S	I	.	R	V	D	G	N	D	V	F	A	V	Y	N	A	T	K	E	A	R	R	R	A	V	A	E	N	Q	P
Template Known Secondary structure												T	T		.										S			T	T			G	G	G	T		S	S	S	T	T	G	G	G	T	G	G	G	T					.				T	T																				T
Template Predicted Secondary structure															.																																							.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.											.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.
Predicted Secondary structure																									.	.	.																	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		S	L	L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	.	.	.	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	.	.	.	.	.	.	.	.	.	.	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	.	A	G	Q	A	K	E
Query Conservation																									.	.	.																	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		F	L	I	E	A	M	T	Y	R	I	G	S	T	D	H	P	I	S	R	L	R	H	Y	L	L	S	Q	G	W	W	D	E	E	Q	E	K	A	W	R	K	Q	S	R	R	K	V	M	E	A	F	E	Q	A	E	R	K	P	K	P	N	P	N	L	L	F	S	D	V	Y	Q	E	M	P	A	Q	L	R	K	Q	Q
Template Known Secondary structure																										T	T	T	T																												S		B			G	G	G	G	S	T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P	Q	E	A	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	L	A	R	H	L	Q	T	Y	G	E	H	Y	P	L	D	H	F	D
Template Known Secondary structure												G	G	G	S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions