Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 33 Aligned Residues 176 % Identity 13% Template d1umdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D	A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	.
Query Conservation																																																																																	.
Alig confidence																																																																								.									.
Template Conservation																																																																								.
Template Sequence		M	T	M	V	Q	A	L	N	R	A	L	D	E	E	M	A	K	D	P	R	V	V	V	L	G	E	D	V	G	K	R	G	G	V	F	L	V	T	E	G	L	L	Q	K	Y	G	P	D	R	V	M	D	T	P	L	S	E	A	A	I	V	G	A	A	L	G	M	A	A	H	.	G	L	R	P	V	A	E	I	Q
Template Known Secondary structure																				T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S																.	T								S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.							.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																	.				.	.	.	.	.	.
Query SS confidence																	.				.	.	.	.	.	.
Query Sequence		F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	.	A	L	M	.	.	.	.	.	.	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G
Query Conservation																	.				.	.	.	.	.	.
Alig confidence																	.				.	.	.	.	.	.															.
Template Conservation																																									.
Template Sequence		F	A	D	Y	I	F	P	G	F	D	Q	L	V	S	Q	V	A	K	L	R	Y	R	S	G	G	Q	F	T	A	P	L	V	V	R	M	P	S	G	G	.	G	V	R	G	G	H	H	H	S	Q	S	P	E	A	H	F	V	H	T	A	G	L	K	V	V	A	V	S	T	P	Y	D	A	K	G	L	L	K	A	A
Template Known Secondary structure		S	G	G	G		G	G	G							T	T	T	T					T	T	T	S	S												S	.	S	S	S		G	G	G	S	S									T	S	T	T								S
Template Predicted Secondary structure																																									.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		I	R	D	.	E	D	P	V	V	F	L	E	P	K	R	L	Y	R	S	V	K	E	E	V	P	E	E
Template Known Secondary structure					.	S	S								G	G	G	S	S	S
Template Predicted Secondary structure					.
Template SS confidence
		162	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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