Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 28 Aligned Residues 190 % Identity 46% Template d1gpua2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.86

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.							.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	.	.	.	.	.	.	S	K	A	I	N	E	D	A	A	G	N	Y	I	H	Y	G	V	R
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	A	N	W	E	S	K	L	P	T	Y	T	A	K	D	S	A	V	A	T	R	K	L	S	E	T	V	L	E	D	V	Y	N	Q	L	P	E	L	I	G	G	S	A	D	L	T	P	S	N	L	T	R	W	K	E	A	L	D	F	Q	P	P	S	S	G	S	G	N	Y	S	G	R	Y	I	R	Y	G	I	R
Template Known Secondary structure				T	T	G	G	G	G	S					T	T	S			B														T	T	T		T	T						S	S						T		S		T	T							T	T	T	S	S			T	T								S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	.	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	R	V	T	P	N	M	S
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		E	H	A	M	G	A	I	M	N	G	I	S	A	F	G	A	N	Y	K	P	Y	G	G	T	F	L	N	F	V	S	Y	A	A	G	A	V	R	L	S	A	L	S	G	H	P	V	I	W	V	A	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	T	L	A	H	F	R	S	L	P	N	I	Q
Template Known Secondary structure																	T	T													G	G	G											T											S	G	G	G		T	T		T	T	T			S	S							T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	W	R	P	A	D	G	N	E	V	S	A	A	Y	K	N	S	L	E	S	K	H	T	P	S	I	I	A	L	S	R	Q	N	L	P	Q	L
Template Known Secondary structure							S															S	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions