Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 10 Aligned Residues 599 % Identity 27% Template c3mosA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: the structure of human transketolase Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	R	K	E	L	A	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	A	L	K	D	T	A	N	R	L	R	I	S	S	I	Q	A	T	T	A	A	G	S	G	H	P	T	S	C	C	S	A	A	E	I	M	A	V	L	F	F	H	T	M	R	Y	K	S	Q	D	P	R	N	P	H	N	D	R	F	V	L	S	K	G	H	A	A	P	I	L	Y	A	V	W	A	E	A	G	F
Template Known Secondary structure																								T		S							T	T										T	T		B			T	T		T	T		T	T	S						S	S	G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E
Query Conservation
Alig confidence		.																							.																																	.	.	.	.	.	.	.	.	.
Template Conservation		.																							.																																	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	A	E	A	E	L	L	N	L	R	K	I	S	S	D	L	D	G	H	P	V	P	.	K	Q	A	F	T	D	V	A	T	G	S	L	G	Q	G	L	G	A	A	C	G	M	A	Y	T	G	K	Y	F	D	K	A	.	.	.	.	.	.	.	.	.	S	Y	R	V	Y	C	L	L	G	D	G	E	L	S	E
Template Known Secondary structure		.	S		G	G	G	G	G	G	T	T		T	T		S			S	S			T	.	T	S	T	T		S	S				S	T	T																T	S			.	.	.	.	.	.	.	.	.	S									T	G	G	G	G	S
Template Predicted Secondary structure		.																							.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
			92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	.	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S
Query Conservation																																										.
Alig confidence																																										.														.																			.	.	.
Template Conservation																																																								.																			.	.	.
Template Sequence		G	S	V	W	E	A	M	A	F	A	S	I	Y	K	L	D	N	L	V	A	I	L	D	I	N	R	L	G	Q	S	D	P	A	P	L	Q	H	Q	M	D	I	Y	Q	K	R	C	E	A	F	G	W	H	A	I	.	I	V	D	G	H	S	V	E	E	L	C	K	A	F	G	Q	A	K	.	.	.	H	Q	P	T
Template Known Secondary structure														T	T		T	T									S	B		S	S	S	B		T	T	T	T												T	T					.				T	T											S			.	.	.	S	S
Template Predicted Secondary structure																																																								.																			.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	I	A	K	T	F	K	G	R	G	I	T	G	V	E	D	K	E	S	W	H	G	K	P	L	P	K	N	M	A	E	Q	I	I	Q	E	I	Y	S	Q	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T	T	S	T	T	T	T	T		S	S		T	T																		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	A	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D
Query Conservation
Alig confidence																																																																					.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		S	K	K	K	I	L	A	T	P	P	Q	E	D	A	P	S	V	D	I	A	N	I	R	M	P	S	L	P	S	Y	K	V	G	D	K	I	A	T	R	K	A	Y	G	Q	A	L	A	K	L	G	H	A	S	D	R	I	I	A	L	D	G	D	T	K	N	S	T	.	.	.	.	.	F	S	E	I	F	K	K	E
Template Known Secondary structure									B												S					S	S						T	T		B																			T	T						S	S						.	.	.	.	.	S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	D	R	F	I	E	C	Y	I	A	E	Q	N	M	V	S	I	A	V	G	C	A	T	R	N	R	T	V	P	F	C	S	T	F	A	A	F	F	T	R	A	F	D	Q	I	R	M	A	A	I	S	E	S	N	I	N	L	C	G	S	H	C	G	V	S	I	G	E	D	G	P	S	Q	M	A	L	E	D	L
Template Known Secondary structure			G	G	G						S														G	G	G										G	G	G	G	G	G	G										T	T									S	B	S	G	G	G		T	T		G	G	G		B	S	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	A	G	Q	P	E	L	I	F	I	A	T	G	S
Query Conservation
Alig confidence																																.																									.	.											.
Template Conservation																																.																									.	.											.
Template Sequence		A	M	F	R	S	V	P	T	S	T	V	F	Y	P	S	D	G	V	A	T	E	K	A	V	E	L	A	A	N	T	.	K	G	I	C	F	I	R	T	S	R	P	E	N	A	I	I	Y	N	N	N	E	D	F	Q	.	.	V	G	Q	A	K	V	V	L	K	S	.	K	D	D	Q	V	T	V	I	G	A	G	V
Template Known Secondary structure						T	S	T	T								S													T		.		S								S	S			B			S		T	T					.	.	T	T									.	S	S									T
Template Predicted Secondary structure																																.																									.	.											.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.					.	.	630	.	.	.
Predicted Secondary structure																																												.						.																						.	.	.	.
Query SS confidence																																												.						.																						.	.	.	.
Query Sequence		E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q	D	A	A	Y	R	E	S	V	L	.	P	K	A	V	T	.	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	G	.	.	.	.	A	I	V	G	M	T
Query Conservation																																												.						.																						.	.	.	.
Alig confidence																																												.						.																						.	.	.	.
Template Conservation
Template Sequence		T	L	H	E	A	L	A	A	A	E	L	L	K	K	E	K	I	N	I	R	V	L	D	P	F	T	I	K	P	L	D	R	K	L	I	L	D	S	A	R	A	T	K	G	R	I	L	T	V	E	D	H	Y	Y	E	G	G	I	G	E	A	V	S	S	A	V	V	G	E	P	G	I	T	V	T	H	L	A	V	N
Template Known Secondary structure															T	T	T									S				S													T	T	T										S	T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	G	E	S	A	P	A	E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	P	R	S	G	K	P	A	E	L	L	K	M	F	G	I	D	R	D	A	I	A	Q	A	V	R
Template Known Secondary structure		S					S									T	T		S									T
Template Predicted Secondary structure
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.