Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 9 Aligned Residues 626 % Identity 45% Template c3m7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and3 magnesium ion Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	R	K	E	L	A	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		I	Q	I	L	Q	E	Q	A	N	T	L	R	F	L	S	A	D	X	V	Q	K	A	N	S	G	H	P	G	A	P	L	G	L	A	D	I	L	S	V	L	S	Y	.	H	L	K	H	N	P	K	N	P	T	W	L	N	R	D	R	L	V	F	S	G	G	H	A	S	A	L	L	Y	S	F	L	H	L	S	G	Y
Template Known Secondary structure																								T		S																		.						T	T		T	T		T	T	S						S	S	G	G	G												T
Template Predicted Secondary structure																																												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E
Query Conservation
Alig confidence																									.																															.	.	.
Template Conservation																									.																															.	.	.
Template Sequence		D	L	S	L	E	D	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	I	.	S	T	L	G	V	E	I	A	T	G	P	L	G	Q	G	V	A	N	A	V	G	F	A	X	A	A	K	K	A	Q	.	.	.	N	L	L	G	S	D	L	I	D	H	K	I	Y	C	L	C	G	D	G	D	L	Q	E
Template Known Secondary structure		S								T	T	T		T	T		S	S		S	S			T	.	T	S	T	T			S				S	T	T																		.	.	.					T	T	T																S
Template Predicted Secondary structure																									.																															.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S	L
Query Conservation
Alig confidence																																																							.																				.
Template Conservation																																																							.																				.
Template Sequence		G	I	S	Y	E	A	C	S	L	A	G	L	H	K	L	D	N	F	I	L	I	Y	D	S	N	N	I	S	I	E	G	D	V	G	L	A	F	N	E	N	V	K	X	R	F	E	A	Q	G	F	E	V	L	.	S	I	N	G	H	D	Y	E	E	I	N	K	A	L	E	Q	A	K	K	.	S	T	K	P	C	L
Template Known Secondary structure														T	T		T	T									S			T	T			G	G	G	T												T	T					.				T	T														T	.		S	S
Template Predicted Secondary structure																																																							.																				.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.																.
Query SS confidence																																									.																.
Query Sequence		L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	.	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	.	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y
Query Conservation																																									.																.
Alig confidence																																									.																.
Template Conservation
Template Sequence		I	I	A	K	T	T	I	A	K	G	A	G	E	L	E	G	S	H	K	S	H	G	A	P	L	G	E	E	V	I	K	K	A	K	E	Q	A	G	F	D	P	N	I	S	F	H	I	P	Q	A	S	K	I	R	F	E	S	A	V	E	L	G	D	L	E	E	A	K	W	K	D	K	L	E	K	S	A	K	K	E
Template Known Secondary structure								T	T	T	T		G	G	G	T	T		G	G	G	S	S	S															T			T	T			S																																T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	E	A	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		L	L	E	R	L	L	N	P	D	F	N	K	I	A	Y	P	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	D	L	A	T	R	D	S	N	G	E	I	L	N	V	L	A	K	N	L	E	G	F	L	G	G	S	A	D	L	G	P	S	N	K	T	.	.	.	E	L	H	S	X	G	D
Template Known Secondary structure								S				T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			B																		T	T						S	S						T		.	.	.			T	T	S		B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.															.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	E	G	K	N	I	H	F	G	I	R	E	H	A	X	A	A	I	N	N	A	F	A	R	Y	G	I	F	L	P	F	S	A	T	F	F	I	F	S	E	Y	L	K	P	A	A	R	I	A	A	L	X	K	I	K	H	F	F	I	F	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	Q
Template Known Secondary structure		T	T	T	S	S						S																S	S									G	G	G	G	G	G	T											T											S	G	G	G		T	T		G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	A	G	Q	P	E	L	I	F	I	A	T	G
Query Conservation
Alig confidence																																	.																									.	.										.
Template Conservation																																	.																									.	.										.
Template Sequence		L	S	T	F	R	A	X	P	N	F	L	T	F	R	P	A	D	G	V	E	N	V	K	A	W	Q	I	A	L	N	A	.	D	I	P	S	A	F	V	L	S	R	Q	K	L	K	A	L	N	E	P	V	F	G	D	V	.	.	K	N	G	A	Y	L	L	K	E	.	S	K	E	A	K	F	T	L	L	A	S	G
Template Known Secondary structure								S	S	S							S	S														S	.	S	S								S	S		B							S	B			G	.	.	G	G	S	S						.		T	T		S							G
Template Predicted Secondary structure																																	.																									.	.										.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.		.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		S	E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q	D	A	A	Y	R	E	S	V	L	P	.	K	A	V	T	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	G	A	I	V	G	M	T	T	F	G	E
Query Conservation																																														.
Alig confidence																																														.														.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		S	E	V	W	L	C	L	E	S	A	N	E	L	E	K	Q	G	F	A	C	N	V	V	S	X	P	C	F	E	L	F	E	K	Q	D	K	A	Y	Q	E	R	L	L	K	G	E	V	I	G	V	E	A	A	H	S	N	E	L	.	.	.	.	.	.	.	Y	K	F	C	H	K	V	Y	G	I	E	S	F	G	E
Template Known Secondary structure		G	G														T	T									S	B						T	S									S		S							S	S			G	G	G	.	.	.	.	.	.	.	G	G	T		S							S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.								.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	A	E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	K	D	K	D	V	F	E	R	F	G	F	S	V	S	K	L	V	N	F	I	L	S
Template Known Secondary structure		S	S									T	T		S									T	T
Template Predicted Secondary structure
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.