Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 6 Aligned Residues 643 % Identity 53% Template c3komB_ PDB info PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of apo transketolase from francisella tularensis Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	R	K	E	L	A	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	P	R	E	F	S	N	A	I	R	F	L	S	I	D	A	T	L	K	A	K	S	G	H	P	G	X	P	X	G	X	A	D	I	A	T	V	L	W	T	K	F	L	K	H	N	P	N	N	P	H	W	I	N	R	D	R	F	V	L	S	N	G	H	G	S	X	L	L	Y	S	L	L	H	L	T	G	Y	D
Template Known Secondary structure																							T		S																			T					T	T		T	T		T	T								S	S	S													T		S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E	G
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		L	S	I	E	D	I	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	Y	G	Y	T	P	G	V	E	T	T	T	G	P	L	G	Q	G	V	A	N	A	V	G	X	A	L	G	E	K	L	L	S	D	R	Y	N	T	P	D	L	K	V	I	D	H	H	T	Y	V	F	L	G	D	G	.	L	X	E	G
Template Known Secondary structure								T	T	T	T		T	T		S	S		S	S			T	T	T	S	T	T			S				S	T	T																						B	T	T	B		S													.			S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S	L	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		V	S	H	E	A	C	S	L	A	G	T	L	G	L	N	K	L	V	A	F	W	D	D	N	N	T	K	G	W	F	S	D	.	.	.	.	.	.	N	T	P	E	R	F	R	A	Y	G	W	H	V	I	E	N	V	D	G	H	D	F	V	A	I	E	K	A	I	N	E	A	H	S	Q	Q	Q	K	P	T	L	I
Template Known Secondary structure													T	T		T	T											T	T	T				.	.	.	.	.	.									T	T									T	T														T		S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P	Q	E
Query Conservation
Alig confidence																.	.	.	.	.																																																							.	.
Template Conservation																.	.	.	.	.																																																							.	.
Template Sequence		C	C	K	T	V	I	G	F	G	S	P	E	K	A	.	.	.	.	.	G	G	S	P	L	S	D	Q	E	R	A	S	A	A	K	E	L	N	W	D	Y	Q	A	F	E	I	P	Q	D	V	Y	K	Y	W	D	A	R	E	K	G	Q	A	L	E	A	N	W	Q	G	Q	R	N	L	F	.	.	K	D	S	P	K
Template Known Secondary structure							T	T	T	T		T	T	T		.	.	.	.	.																	T	T					T	T																														G	.	.	G	G	S	T	T
Template Predicted Secondary structure																.	.	.	.	.																																																							.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	E	F	E	R	V	L	S	K	E	L	P	V	G	L	E	S	A	I	N	D	Y	I	A	S	Q	L	S	N	P	V	K	V	A	T	R	K	A	S	Q	X	V	L	E	V	L	C	K	N	X	P	E	X	F	G	G	S	A	D	L	T	S	N	N	T	N	W	S	G	S	V	W	L	N	N	T	Q	E	G
Template Known Secondary structure											T				T	T															S				B																		T	T							S									T	T			B	T	T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	Y	L	S	Y	G	V	R	E	F	G	X	A	A	I	X	N	G	L	S	L	Y	G	G	I	K	P	Y	G	G	T	F	L	V	F	S	D	Y	S	R	N	A	I	R	X	S	A	L	X	K	Q	P	V	V	H	V	X	S	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	I	E	H	V	P	S
Template Known Secondary structure									S																S	S									G	G	G														T	T											S	G	G	G		T	T		T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	A	G	Q	P	E	L	I	F	I	A	T	G	S	E	V
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		L	R	L	I	P	N	L	S	V	W	R	P	A	D	T	I	E	T	X	I	A	W	K	E	A	V	K	S	K	D	T	P	S	V	X	V	L	T	R	Q	N	L	X	P	V	V	Q	T	Q	H	Q	V	A	N	I	A	R	G	G	Y	L	V	K	D	.	N	P	D	A	K	L	T	I	V	A	T	G	S	E	V
Template Known Secondary structure				T	S	T	T								S															S	S									S	S		B														T	T	T							.		T	T									T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590				.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.																																						.
Query SS confidence																															.	.	.																																						.
Query Sequence		E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	.	.	.	K	Q	D	A	A	Y	R	E	S	V	L	P	K	A	V	T	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	G	.	A	I	V	G	M	T	T	F	G	E
Query Conservation																															.	.	.																																						.
Alig confidence																															.	.	.																			.	.	.	.																.
Template Conservation																																																				.	.	.	.
Template Sequence		E	L	A	V	K	V	A	N	E	F	E	K	K	G	I	K	L	N	V	A	S	I	P	C	V	E	V	F	A	T	Q	A	H	E	Y	K	K	T	V	I	K	D	D	I	P	A	V	F	V	E	.	.	.	.	X	A	Q	P	D	X	W	Y	K	Y	X	P	K	A	G	G	E	V	K	G	I	Y	S	F	G	E
Template Known Secondary structure														T	T									S							T	S									T	T	T	T	S							.	.	.	.	S	S			G	G	G	G	G	G			T	T									S
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.					.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	A	E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	P	A	E	D	L	F	K	R	F	G	F	T	V	E	N	I	S	N	I	V	A	K	Y	V
Template Known Secondary structure		S	S										T		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.