Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 2 Aligned Residues 656 % Identity 50% Template c3hylB_ PDB info PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase from bacillus anthracis Resolution 2.16 Å

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		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		S	R	K	E	L	A	.	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y	D
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		S	I	E	Q	L	S	I	N	T	I	R	T	L	S	I	D	A	I	E	K	A	N	S	G	H	P	G	X	P	X	G	A	A	P	X	A	Y	T	L	W	T	Q	F	X	K	H	N	P	N	N	P	T	W	F	N	R	D	R	F	V	L	S	A	G	H	G	S	X	L	L	Y	S	L	L	H	L	S	G	Y	D
Template Known Secondary structure																							T		S																			T					T	T		T	T		T	T	S						S	S	G	G	G											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	X	D	D	L	K	N	F	R	Q	W	G	S	K	T	P	G	H	P	E	Y	G	H	T	A	G	V	D	A	T	T	G	P	L	G	Q	G	I	A	T	A	V	G	X	A	X	A	E	R	H	L	A	A	K	Y	N	R	D	A	Y	N	I	V	D	H	Y	T	Y	A	I	C	G	D	G	D	L	X	E	G
Template Known Secondary structure								T	T	T	T		T	T		S			S	S			T	T	T	S	T	T			S				S	T	T																							S	S				S															S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A	E	A	S	S	L	A	A	H	L	Q	L	G	R	L	V	V	L	Y	D	S	N	D	I	S	L	D	G	D	L	N	R	S	F	S	E	S	V	E	D	R	Y	K	A	Y	G	W	Q	V	I	R	V	E	D	G	N	D	I	E	A	I	A	K	A	I	E	E	A	K	A	D	E	K	R	P	T	L	I
Template Known Secondary structure													T	T		T	T									S	B		S	S	S	B	G	G	G	T													T							S		T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																.	.
Query SS confidence																																								.																.	.
Query Sequence		M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	.	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	.	.	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y
Query Conservation																																								.																.	.
Alig confidence																																								.																.	.
Template Conservation
Template Sequence		E	V	R	T	T	I	G	F	G	S	P	N	K	S	G	K	S	A	S	H	G	S	P	L	G	V	E	E	T	K	L	T	K	E	A	Y	A	W	T	A	E	Q	D	F	H	V	A	E	E	V	Y	E	N	F	R	K	T	V	Q	D	V	G	E	T	A	Q	A	E	W	N	T	X	L	G	E	Y	A	Q	A	Y
Template Known Secondary structure							T	T	T	T		T	T	T	T	T	S	G	G	G	T	S	S														T	T					S	S	S														T																						S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		P	Q	E	A	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	.	W	S	G	S	K	A	I	N
Query Conservation																																																																									.
Alig confidence																											.	.	.	.	.																																										.
Template Conservation																											.	.	.	.	.
Template Sequence		P	E	L	A	N	E	L	Q	A	A	X	N	G	L	L	P	E	G	W	E	Q	N	L	P	T	.	.	.	.	.	Y	E	L	G	S	K	A	A	T	R	N	S	S	G	A	V	I	N	A	I	A	E	S	V	P	S	F	F	G	G	S	A	D	L	A	G	S	N	K	T	Y	X	N	N	E	K	D	F	T	R
Template Known Secondary structure													T	T				T	T	G	G	G	G				.	.	.	.	.			T	T																					T	T						S	S						T				T	T	S		B		B	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	Y	S	G	K	N	I	W	Y	G	V	R	E	F	A	X	G	A	A	X	N	G	I	A	L	H	G	G	L	K	T	Y	G	G	T	F	F	V	F	S	D	Y	L	R	P	A	I	R	L	A	A	L	X	Q	L	P	V	T	Y	V	F	T	H	D	S	I	A	V	G	E	D	G	P	T	H	E	P	I	E
Template Known Secondary structure		T	B	T	T								S																S	S									G	G	G															T											S	G	G	G	G	G	G		G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.		.	.	.	550	.	.	.	.	.
Predicted Secondary structure																																																				.																				.
Query SS confidence																																																				.																				.
Query Sequence		Q	V	A	S	L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	.	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	.	A	G	Q	P	E	L	I	F	I
Query Conservation																																																				.																				.
Alig confidence																																																				.																				.
Template Conservation
Template Sequence		Q	L	A	A	L	R	A	X	P	N	V	S	V	I	R	P	A	D	G	N	E	S	V	A	A	W	R	L	A	L	E	S	T	N	K	P	T	A	L	V	L	T	R	Q	D	L	P	T	L	E	G	A	K	D	D	T	Y	E	K	V	A	K	G	A	Y	V	V	S	A	S	K	K	E	T	A	D	V	I	L	L
Template Known Secondary structure								T	S	T	T							S	S															S	S	S								S	S						G	G	G	S	T	T							T	S								S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	S	E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q	D	A	A	Y	R	E	S	V	L	P	K	A	V	T	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	G	A	I	V	G	M	T	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	G	S	E	V	S	L	A	V	E	A	Q	K	A	L	A	V	D	G	V	D	A	S	V	V	S	X	P	S	X	D	R	F	E	A	Q	T	A	E	Y	K	E	S	V	L	P	K	A	V	T	K	R	F	A	I	E	X	G	A	T	F	G	W	H	R	Y	V	G	L	E	G	D	V	L	G	I	D	T	F
Template Known Secondary structure				G	G	G														T	T									S								S									S		T	T									S	S			T	T	T					T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	A	P	A	E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	S	A	P	G	E	K	I	X	E	E	Y	G	F	T	V	E	N	V	V	R	K	V	K	E	X	L
Template Known Secondary structure				S	S									T	T		S
Template Predicted Secondary structure
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.