Return to main results Retrieve Phyre Job Id

Job DescriptionP27302
Confidence20.69%DateThu Jan 5 11:43:48 GMT 2012
Rank333Aligned Residues94
% Identity11%Templatec3g8rA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   553..... .560.........570.........580.........590.. .......600. ........610.........620.....
Predicted Secondary structure 

.











.....
.






Query SS confidence 





.

































. . . . .








.























Query Sequence  IFIATG. SEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQ. . . . . DAAYRESVL. PKAVTARVAVEAGIADYWYKYVGL
Query Conservation   

  
.  
  

 

  
   

   

      
 
  .....         .   
  
    

           
Alig confidence 





.

































.....








.























Template Conservation 









 

  

      
  
 



 
 

   
  

  
  

  
    

 



 
        



Template Sequence  VVASTAGARREDIDKVVSFXLHRGKDLTIXHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLXEPIXLAVAQ
Template Known Secondary structure 
TT

TTT





SS

GGG

TT
TTS


SS

T
Template Predicted Secondary structure 
































Template SS confidence 















































































   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   626...630 .........640........
Predicted Secondary structure 


...........









Query SS confidence 




. . . . . . . . . . .

















Query Sequence  NGAIV. . . . . . . . . . . GMTTFGESAPAELLFEEF
Query Conservation       ........... 
  
   
    
    
Alig confidence 




...........




..










Template Conservation 

 









   
 

 ..

 
 

  

Template Sequence  GATVFEKHVGLPTDQYGINNY. . SANPEQVRRWL
Template Known Secondary structure  T

B


BTTB


TT..
B
Template Predicted Secondary structure 












..


Template SS confidence 

































   218.220.........230........ .240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions