Job Description P27302 Confidence 76.43% Date Thu Jan 5 11:43:48 GMT 2012 Rank 109 Aligned Residues 75 % Identity 16% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		549	550	.	.	.	.	.			.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.														.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure									.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	E	L	I	F	I	.	.	A	T	G	S	E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	A	A	Y	R	E	S	V	L	P	K	A	V	T	A	R	V	A	V	E	A
Query Conservation									.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	N	I	L	V	L	F	Y	G	Y	G	S	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	S	P	T	R	Y	G
Template Known Secondary structure												S	S																	T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S									B	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		614	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	D	Y	W	Y	K	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	M	A	G	G	L	K	T	F	L
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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