Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 30 Aligned Residues 496 % Identity 13% Template c2yicC_ PDB info PDB header:lyase Chain: C: PDB Molecule:2-oxoglutarate decarboxylase; PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form) Resolution 1.96 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																				.	.	.
Query SS confidence																																																.																				.	.	.
Query Sequence		G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	.	E	G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	.	.	.	I	A	F	Y	D	D	N	G	I	S	I
Query Conservation																																																.																				.	.	.
Alig confidence																							.	.	.																							.																	.			.	.	.
Template Conservation																							.	.	.																																								.
Template Sequence		S	H	L	E	A	V	D	P	V	L	E	G	L	V	R	A	K	Q	D	L	L	.	.	.	D	T	G	E	E	G	R	F	S	V	V	P	L	M	L	H	G	D	A	A	F	A	G	Q	G	V	V	A	E	T	L	N	L	A	L	L	R	G	Y	.	R	T	G	G	T	I	H	I	V	V	N	N	Q	I	G	F
Template Known Secondary structure		S	S	T	T	T	T															T	.	.	.	T		S	T	T																											T	T	T	T		T	T	T	.			S										S		B	T
Template Predicted Secondary structure																							.	.	.																																								.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.				.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.		.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure													.																																				.	.	.
Query SS confidence													.																																				.	.	.
Query Sequence		D	G	H	V	E	G	W	F	T	D	D	.	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	.	.	.	D	K	P	S	L	L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L
Query Conservation													.																																				.	.	.
Alig confidence													.															.																					.	.	.																							.	.	.	.	.
Template Conservation																												.																																														.	.	.	.	.
Template Sequence		T	T	A	P	T	D	S	R	S	S	E	Y	C	T	D	V	A	K	M	I	G	A	P	I	F	H	.	V	N	G	D	D	P	E	A	C	A	W	V	A	R	L	A	V	D	F	R	Q	A	F	K	K	D	V	V	I	D	M	L	C	Y	R	R	R	G	H	N	E	G	D	D	P	.	.	.	.	.	S	M	T
Template Known Secondary structure		T	B							S	S	S	S	T	T	G	G	G	G	G	G	T						.			T	T																																	S		S	S	T	T			G	.	.	.	.	.	G	G	T
Template Predicted Secondary structure																												.																																														.	.	.	.	.
Template SS confidence
		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.		.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.						.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																												.	.	.	.	.
Query SS confidence																.																																												.	.	.	.	.
Query Sequence		G	D	A	E	I	A	L	T	R	E	Q	L	G	W	.	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P	Q	E	A	.	.	.	.	.	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A
Query Conservation																.																																												.	.	.	.	.
Alig confidence																.																																												.	.	.	.	.
Template Conservation
Template Sequence		Q	P	Y	M	Y	D	V	I	D	T	K	R	G	S	R	K	A	Y	T	E	A	L	I	G	R	G	D	I	S	M	K	E	A	E	D	A	L	R	D	Y	Q	G	Q	L	E	R	V	F	N	E	V	R	E	L	E	K	H	E	L	A	T	A	V	D	K	A	M	L	Q	R	I	G	D	A	H	L	A	L	P	E
Template Known Secondary structure										T	T															T	T	S	S																																															T	T				T
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.
		340	.	.	.	.	.	.									.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																					.	.	.	390	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	K	E	F	I	A	.	.	.	.	.	.	.	.	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	L	W	S
Query Conservation									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	T	V	H	P	R	V	R	P	V	L	E	K	R	R	E	M	A	Y	E	G	R	I	D	W	A	F	A	E	L	L	A	L	G	S	L	I	A	E	G	K	L	V	R	L	S	G	Q	D	T	Q	R	G	T	F	T	Q	R	H	A	V	I	V	D	R	K	T	G	E	E	F	T	P	L	Q	L	L	A	T
Template Known Secondary structure		T					T	T	T																B																T	T								T	T	T	T	T		T	T	S				S	S				T	T	T						G	G	G	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.						.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																										.	.			.																.	.	.	.	.
Query SS confidence																																										.	.			.																.	.	.	.	.
Query Sequence		G	S	K	A	I	N	E	D	A	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	.	.	S	T	.	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	.	.	.	.	.	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S
Query Conservation																																										.	.			.																.	.	.	.	.
Alig confidence																																			.							.	.			.																.	.	.	.	.															.
Template Conservation																																			.																																														.
Template Sequence		N	P	D	G	T	P	T	G	G	K	F	L	V	Y	N	S	A	L	S	E	F	A	A	V	G	F	E	Y	G	Y	S	V	G	.	N	P	D	A	M	V	L	W	E	A	Q	F	G	D	F	V	N	G	A	Q	S	I	I	D	E	F	I	S	S	G	E	A	K	W	G	Q	L	S	D	V	V	L	L	L	P	.
Template Known Secondary structure			T	T	S		B		S										S		S														.		T	T	S							S	S	G	G	G	G	G	G	G							T	T	T	T																	.
Template Predicted Secondary structure																																			.																																														.
Template SS confidence
		933	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.		.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																														.																													.
Query SS confidence																					.	.																														.																													.
Query Sequence		I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	.	.	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	.	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	.
Query Conservation																					.	.																														.																													.
Alig confidence																					.	.																														.																													.
Template Conservation
Template Sequence		H	G	H	E	G	Q	G	P	D	H	T	S	G	R	I	E	R	F	L	Q	L	W	A	E	G	S	M	T	I	A	M	P	S	T	P	A	N	Y	F	H	L	L	R	R	H	G	K	D	G	I	Q	R	P	L	I	V	F	T	P	K	S	M	L	R	N	K	A	A	V	S	D	I	R	D	F	T	E	S	K	F
Template Known Secondary structure					S	S	S		T	T	S	S													T	T	S								S														S	S											S	G	G	G	G		T	T	S		B							S
Template Predicted Secondary structure
Template SS confidence
		1011	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090
		540	.	.	.	.	.									.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600				.	.	.	.	.	.		.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																																								.	.	.							.
Query SS confidence								.	.	.	.	.	.	.	.																																																								.	.	.							.
Query Sequence		G	Y	V	L	K	D	.	.	.	.	.	.	.	.	C	A	G	Q	P	E	L	I	F	I	A	T	G	S	E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q	D	A	A	Y	R	E	S	V	.	.	.	L	P	K	A	V	T	.	A
Query Conservation								.	.	.	.	.	.	.	.																																																								.	.	.							.
Alig confidence								.	.	.	.	.	.	.	.														.							.																																			.	.	.							.
Template Conservation																													.							.
Template Sequence		R	S	V	L	E	E	P	M	Y	T	D	G	E	G	D	R	N	K	V	T	R	L	L	L	T	S	G	.	K	I	Y	Y	E	L	.	A	A	R	K	A	K	E	N	R	E	D	V	A	I	V	R	I	E	Q	L	A	P	L	P	R	R	R	L	A	E	T	L	D	R	Y	P	N	V	K	E	K	F	W	V	Q
Template Known Secondary structure			S									T	S	S			G	G	G									S	.	T						.								T		T	T											S											T	T		T	T
Template Predicted Secondary structure																													.							.
Template SS confidence
		1091	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.		.	.	1120	.	.	.		.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	P	A	N	Q	G	A	W	P	S	F	G	L	T	L
Template Known Secondary structure					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1169	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.