Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 7 Aligned Residues 642 % Identity 48% Template c2e6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: x-ray structure of thermus thermopilus hb8 tt0505 Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	S	R	K	E	L	A	.	N	A	I	R	A	L	S	M	D	A	V	Q	K	A	K	S	G	H	P	G	A	P	M	G	M	A	D	I	A	E	V	L	W	R	D	F	L	K	H	N	P	Q	N	P	S	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	I	Y	S	L	L	H	L	T	G	Y
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		R	D	L	E	T	L	S	V	N	A	I	R	F	L	A	I	D	A	V	E	K	A	R	S	G	H	P	G	X	P	X	G	X	A	P	L	A	Y	L	L	F	R	E	V	X	R	H	N	P	L	D	P	D	W	P	D	R	D	R	F	V	L	S	A	G	H	G	S	X	L	L	Y	A	V	L	H	L	T	G	Y
Template Known Secondary structure																								T		S																		T	T					T	T		T	T		T	T	S						S	S	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	M	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	V	G	Y	T	A	G	V	E	T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	G	D	G	C	M	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	L	E	E	L	K	S	F	R	Q	W	G	S	K	T	P	G	H	P	E	R	G	H	T	P	G	V	E	V	T	T	G	P	L	G	Q	G	I	S	T	A	V	G	L	A	L	A	E	R	K	L	A	A	E	F	N	R	P	G	H	V	V	V	D	H	Y	T	Y	V	L	A	S	D	G	D	L	X	E
Template Known Secondary structure		S							T	T	T	T		T	T		S			S	S			T	T	T	S	T	T			S				S	T	T																						B	T	T	B																		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	I	A	F	Y	D	D	N	G	I	S	I	D	G	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	D	K	P	S	L
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence		G	V	S	G	E	A	A	S	L	A	G	H	W	G	L	S	K	L	I	V	F	W	D	D	N	R	I	S	I	D	G	P	T	D	L	A	F	T	E	D	V	L	A	R	Y	R	A	Y	G	W	Q	T	L	R	V	E	D	V	N	D	L	E	A	L	R	K	A	I	K	L	A	K	L	.	D	E	R	P	T	L
Template Known Secondary structure															T		T	T												T	T			G	G	G	T			S									T	T							S		T	T															.	S	S	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D	S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P	Q
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		I	A	V	R	S	H	I	G	F	G	S	P	.	K	Q	D	S	A	K	A	H	G	E	P	L	G	P	E	A	V	E	A	T	R	R	N	L	G	W	P	Y	P	P	F	V	V	P	E	E	V	Y	R	H	X	D	X	R	E	K	G	R	A	W	Q	E	A	W	E	K	A	L	E	A	Y	A	R	A	Y	P	D
Template Known Secondary structure								T	T	T	T	S	T	.	T	T	T	S	G	G	G	T	S	S														T	T					T	T
Template Predicted Secondary structure														.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	E	F	T	R	R	M	K	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		L	H	Q	E	L	X	R	R	L	R	G	E	L	P	P	L	.	.	.	.	.	.	.	.	P	E	E	P	P	S	F	D	K	P	I	A	T	R	A	A	S	G	R	A	L	N	L	L	A	P	R	L	P	E	L	L	G	G	S	A	D	L	T	P	S	N	N	T	K	A	E	G	X	E	D	F	S	R	A	N
Template Known Secondary structure											T	T						.	.	.	.	.	.	.	.			S						S		B														G	G	G		T	T						S	S						T		S		T	T			B			S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.									.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		401		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	S	T	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		P	L	G	R	Y	L	H	F	G	V	R	E	H	A	X	G	A	I	L	N	G	L	N	L	H	G	G	Y	R	A	Y	G	G	T	F	L	V	F	S	D	Y	X	R	P	A	I	R	L	A	A	L	X	G	V	P	T	V	F	V	F	T	H	D	S	I	A	L	G	E	D	G	P	T	H	Q	P	V	E	H	L
Template Known Secondary structure		T	T								S																S	S									G	G	G	G	G	G	G											T											S	G	G	G		T	T		T	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	A	G	Q	P	E	L	I	F	I	A	T	G	S
Query Conservation
Alig confidence																																																									.	.										.
Template Conservation																																																									.	.										.
Template Sequence		X	S	L	R	A	X	P	N	L	F	V	I	R	P	A	D	A	Y	E	T	F	Y	A	W	L	V	A	L	R	R	K	E	G	P	T	A	L	V	L	T	R	Q	A	V	P	L	L	S	P	E	K	A	R	G	L	.	.	L	R	G	G	Y	V	L	E	D	.	V	E	E	P	Q	G	V	L	V	A	T	G	S
Template Known Secondary structure						T	S	T	T							S	S																S	S								S	S		B					T	T	G	G	G	G	G	.	.	G	G	S	S						.		S	S		S							T	T
Template Predicted Secondary structure																																																									.	.										.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.			530	.	.	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	.	.	.	Q	D	A	A	Y	R	E	S	V	L	P	K	A	V	T	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	G	A	I	V	G	M	T	T	F	G
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																									.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		E	V	H	L	A	L	R	A	Q	A	L	L	R	E	K	G	V	R	V	R	V	V	S	L	P	S	F	E	L	F	A	A	Q	P	E	A	Y	R	K	E	V	L	P	P	G	L	P	V	V	A	V	E	A	G	A	S	L	G	W	.	.	.	.	.	.	.	E	R	Y	A	H	K	V	V	A	L	D	R	F	G
Template Known Secondary structure																T	T									S							T	S									S		T	T	S							S	S			T	T	G	.	.	.	.	.	.	.	G	G	T		S							S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610								.	.	.	.	.	.	.	.	.	620	.	.	.	.
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	A	P	A	E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	A	P	Y	P	E	V	Y	E	R	L	G	F	T	P	E	R	V	A	E	A	F	L	S	L	V
Template Known Secondary structure			S			T	T						T	T		S										T	T
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.