Job Description P27302 Confidence 100.00% Date Thu Jan 5 11:43:48 GMT 2012 Rank 20 Aligned Residues 309 % Identity 12% Template c1olsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase Resolution 1.85 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L	A	P	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D	A	.	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S
Query Conservation																																																											.
Alig confidence																																										.	.																.
Template Conservation																																										.	.
Template Sequence		T	F	Q	P	E	Y	G	Q	T	Q	K	M	N	L	F	Q	S	V	T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	.	.	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A
Template Known Secondary structure								S																							T	T						T	T	T	T	.	.	T	T		T	T	S	T	T	T	T							T	T	T						S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		423	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450								.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure													.																		.	.	.	.	.	.	.
Query SS confidence													.																		.	.	.	.	.	.	.
Query Sequence		L	H	G	G	F	L	P	Y	T	S	T	.	F	L	M	F	V	E	Y	A	R	N	A	V	R	M	A	A	L	.	.	.	.	.	.	.	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	R	V	T	P	N	M	S	T	W	R	P	C
Query Conservation													.																		.	.	.	.	.	.	.
Alig confidence				.									.																		.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		V	T	.	G	A	T	A	I	A	E	I	Q	F	A	D	Y	I	F	P	A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	A	L	Y	H	S	Q	S	P	E	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R
Template Known Secondary structure			T	.	T								S	S	G	G	G		G	G	G						T	T	G	G	G						T	T	S	S			T	T								S			S	S		G	G	G	S	S									T		T	T							S
Template Predicted Secondary structure				.
Template SS confidence
		88	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.			.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	G	P	T	A	L	I	L	S	R	Q	.	.	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	G	Y	V	L	K	D	C	A	G	Q	P	E	L	I	F	I	A	T	G	S	E	V	E	L	A	V	A	A	Y	E	K	L	T
Query Conservation																													.	.
Alig confidence																	.												.	.																											.	.	.
Template Conservation																	.																																								.	.	.
Template Sequence		S	P	F	Q	A	K	G	L	L	L	S	C	I	E	D	.	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E	V	P	I	E	P	Y	N	I	P	L	S	Q	A	E	V	I	Q	E	G	S	.	.	.	D	V	T	L	V	A	W	G	T	Q	V	H	V	I	R	E	V	A	S	M	A	K
Template Known Secondary structure		S														S	.	S	S								G	G	G	S	S	S							S	S						T	T									S	.	.	.	S							T	T
Template Predicted Secondary structure																	.																																								.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		573	.		.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.									.	.	.	630	.	.		.	.	.	.	.	.	.	640	.
Predicted Secondary structure				.																																	.																					.	.	.	.	.	.	.	.							.
Query SS confidence				.																																	.																					.	.	.	.	.	.	.	.							.
Query Sequence		A	E	.	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q	D	A	A	Y	R	E	S	V	L	P	K	A	V	T	.	A	R	V	A	V	E	A	G	I	A	D	Y	W	Y	K	Y	V	G	L	N	.	.	.	.	.	.	.	.	G	A	I	V	G	M	.	T	T	F	G	E	S	A	P	A
Query Conservation				.																																	.																					.	.	.	.	.	.	.	.							.
Alig confidence				.																																	.																					.	.	.	.	.	.	.	.							.								.	.
Template Conservation																																																																																.	.
Template Sequence		E	K	L	G	V	S	C	E	V	I	D	L	R	T	I	I	P	W	D	V	D	T	I	C	K	S	V	I	K	T	G	R	L	L	I	S	H	E	A	P	L	T	G	G	F	A	S	E	I	S	S	T	V	Q	E	E	C	F	L	N	L	E	A	P	I	S	R	V	C	G	Y	D	T	P	F	P	H	I	.	.
Template Known Secondary structure																		S																								S	T	T															T	T	T			S									S	S				S	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	F	E	E	F	G	F	T	V	D	N	V	V	A	K	A	K	E	L	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	F	E	P	F	Y	I	P	D	K	W	K	C	Y	D	A	L	R	K	M	I
Template Known Secondary structure		.	.	T					S
Template Predicted Secondary structure		.	.
Template SS confidence
				321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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