 |
Job Description | P27302 | Confidence | 37.11% | Date | Thu Jan 5 11:43:48 GMT 2012 |
Rank | 228 | Aligned Residues | 31 |
% Identity | 23% | Template | c1lvlA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:dihydrolipoamide dehydrogenase; |
PDBTitle: the refined structure of pseudomonas putida lipoamide dehydrogenase2 complexed with nad+ at 2.45 angstroms resolution
|
Resolution | 2.45 Å |
|
  |   |
549 | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | E | L | I | F | I | A | T | G | S | E | V | E | L | A | V | A | A | Y | E | K | L | T | A | E | G | V | K | A | R | V | V | S |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
| . | . | . |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
Template Sequence |   |
Q | T | T | L | L | I | I | G | G | G | . |
. |
. |
P | G | G | Y | V | A | A | I | R | A | G | Q | L | G | I | P | T | V | L | V | E |
Template Known Secondary structure |   |
 |
| S |  |  |  |  |
|
| S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | |
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|