Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence98.55%DateThu Jan 5 12:06:41 GMT 2012
Rank133Aligned Residues103
% Identity17%Templated8ohma2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   498.500.........510.........520.........530.........540.........550.........560.........570.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH
Query Conservation 
      




         
   
    
       
      
      
         


   

 




 
  
Alig confidence 




























.















.........



















.



Template Conservation   
    
  


  
  


 

  
   .
   
 
   
     .........      










 
 . 
  
Template Sequence  IEVIRGGRHLIFCHSKKKCDELAAKLSAL. GLNAVAYYRGLDVSVI. . . . . . . . . PTSGDVVVVATDALMTGYTG. DFDS
Template Known Secondary structure  GGGTSSS
SS.T


SSS
GGGS.........
SSSS
TTS
TTT

.

S
Template Predicted Secondary structure 







.






.........










.

Template SS confidence 















































































   356...360.........370.........380.... .....390.........400 .........410.........420 ....
 
   578.580... ......590.........600.........610....
Predicted Secondary structure 

.....................








Query SS confidence 





. . . . . . . . . . . . . . . . . . . . .






























Query Sequence  MVMFDL. . . . . . . . . . . . . . . . . . . . . PFNPDLLEQRIGRLDRIGQAHDIQIHVPYLE
Query Conservation 

  
 ..................... 


   





  



   
 
  
   
Alig confidence 





.....................















...











Template Conservation 


 
                  
     
 

  

 




...   
  
     
Template Sequence  VIDCNTCVTQTVDFSLDPTFTIDTTTVPQDAVSRSQRRGRTGR. . . GRRGIYRFVTPG
Template Known Secondary structure 




SSS

BTTS
S...SS
SS

Template Predicted Secondary structure 

















...





Template SS confidence 

























































   425....430.........440.........450.........460....... ..470.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions