 |
Job Description | P60240 | Confidence | 28.95% | Date | Thu Jan 5 12:06:41 GMT 2012 |
Rank | 309 | Aligned Residues | 85 |
% Identity | 12% | Template | d2nu7a2 |
SCOP info | Flavodoxin-like
| Succinyl-CoA synthetase domains
| Succinyl-CoA synthetase domains
|
Resolution | 2.20 |
|
 |
  |   |
505 | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
. | . | . | 530 | . | . | . | . | . | . | . | . | |
|
. | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | V | I | C | A | K | A | A | T | A | L | Q | L | E | Q | V | L | R | E | R | . |
E | G | I | R | A | A | V | F | H | E | G | M | . |
. |
S | I | I | E | R | D | R | A | A | A | W | F | A | E | E | D | T | G | A | Q | V | L | L | C | S | E | I | G | S | E | G | R | N | F | Q | F | A | S | H | M | V | M | F |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |   |
|   |   |   |   |   |   |   |
|   |   | . | . |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |
Template Sequence |   |
K | V | G | I | V | S | R | S | G | T | L | T | Y | E | A | V | K | Q | T | T | D | Y | G | F | G | Q | S | T | C | V | G | I | G | G | D | P | I | P | G | S | N | F | I | D | I | L | E | M | F | E | K | D | P | Q | T | E | A | I | V | M | I | G | E | I | G | G | S | A | E | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| S | S | S | S |
| S | S |
|  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |  |  | S | S | S | S |  |  |  |  | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
582 | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | P | F | N | P | D | L | L | E | Q | R | I | G | R | L | D | R | I | G | Q | A | H | D | I | Q | I | H | V |
Query Conservation |   |
|   |   |
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | A | Y | I | K | E | H | V | T | K | P | V | V | G | Y | I |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|