Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence82.29%DateThu Jan 5 12:06:41 GMT 2012
Rank188Aligned Residues127
% Identity17%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160...... ...170.........180.........190.........200.........210........
Predicted Secondary structure 




.............

















Query SS confidence 














. . . . . . . . . . . . .



















































Query Sequence  TSLIPHQLNIAHDVG. . . . . . . . . . . . . RRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
Query Conservation    
 


        .............     
 











 
   
            


 
 

  

  
Alig confidence 














.............



























.....


















Template Conservation 
 
 
  
  
 
 
                   


 

 




 

  

   .....      
            
Template Sequence  VGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA. . . . . NVPFFHISGSDFVELFVGV
Template Known Secondary structure 

S

TTTT



S

TTSS.....T

GGGTTT

TT
Template Predicted Secondary structure 




















.....









Template SS confidence 















































































   163......170.........180.........190.........200.........210........ .220.........230.......
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA
Query Conservation      
                            

 
   
         
    

 






 


     
     
Alig confidence 




.......................................



































Template Conservation   
   .......................................      
      

 


 
 
             
Template Sequence  GAARV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQL
Template Known Secondary structure  .......................................T
STGGGT



Template Predicted Secondary structure  .......................................




Template SS confidence 















































































   238.240.. .......250.........260.........270........
 
   299300....... ..310.........320..
Predicted Secondary structure 


....








Query SS confidence 








. . . .














Query Sequence  IEQLAEHVP. . . . GVLLLTATPEQLGME
Query Conservation     
     ....  






  
   
Alig confidence 








....














Template Conservation                 
  

        
Template Sequence  LVEMDGFDSKEGIIVMAATNRPDILDPA
Template Known Secondary structure  S
GGGTS
GGGS
GG
Template Predicted Secondary structure 













Template SS confidence 



























   288.290.........300.........310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions