Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence99.67%DateThu Jan 5 12:06:41 GMT 2012
Rank89Aligned Residues262
% Identity18%Templated2bmfa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
Resolution2.41

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190.........200........ .210.........220.........230.........240......
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Query Sequence  RHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVP. ETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPF
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Template Sequence  RKKRLTIMDLHPGAGKTKRYLPAIVREAIKRG. LRTLILAPTRVVAAEMEEALRGLPI. . . . . . . . . . . . . . . . . . RYQT
Template Known Secondary structure  STT



TTSSTTTTT.

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   184.....190.........200.........210..... ....220.........230.........240 ....
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  DTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFA
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Template Sequence  GREIVDLMCHATFTM. . RLLSPIRVPNYNLIIMDEAHFTDPASIAARGYISTR. . VEMGEAAGIFMTATP. . . . . . . . . .
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   253......260....... ..270.........280.........290.........300... ......310........
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  RLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSM
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   407..410.........420.........430.........440.........450.........460.........470.........480......
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Query Sequence  LMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PGSRDPFPQSNAPIMDEERE
Template Known Secondary structure  ............................................................TT


SS


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   319320.........330........
 
   487..490.........500.........510.........520.........530.........540.........550.........560......
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Query Sequence  FDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
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Template Sequence  IPERSWNSGHEWVTDFKGKTVWFVPSIKAGNDIAACLRKN. GKKVIQLSRKTFDSEY. . . . . . IKTRTNDWDFVVTTDIS
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TT
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   339340.........350.........360.........370........ .380.........390.... .....400.........410.
 
   567..570.. .......580.........590.........600..... ....
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Query Sequence  SEGRNF. . . . . . . . . . . . . . . . . . . QFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHD. IQIH
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Template Sequence  EMGANFKAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKNENDQYIY
Template Known Secondary structure  GTT




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   412.......420.........430.........440.........450.........460.........470....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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