Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence100.00%DateThu Jan 5 12:06:41 GMT 2012
Rank12Aligned Residues225
% Identity19%Templated1z3ix1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   429430.........440.........450.........460.........470.........480... ......490.
Predicted Secondary structure 















.................


Query SS confidence 






















































. . . . . . . . . . . . . . . . .







Query Sequence  PKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNAT. . . . . . . . . . . . . . . . . WWNFDPRV
Query Conservation    
                                                    .................      
 
Alig confidence 






















































.................







Template Conservation   
  

   
                  
  
  







 
                                
 

Template Sequence  LQKELYKLFLKQAKPVESLQTGKISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKM
Template Known Secondary structure 
GGGSS
TT



TT
TT
TTGGGTS
SS

SSS

GGGS
Template Predicted Secondary structure 
































Template SS confidence 















































































   413......420.........430.........440.........450.........460.........470.........480.........490..
 
   492.......500. ........510.........520.........530.........540.........550.. .......560.......
Predicted Secondary structure  ...














.






Query SS confidence 









. . .


















































.














Query Sequence  EWLMGYLTSH. . . RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAE. EDTGAQVLLCSEIGS
Query Conservation    
   
   ...   




         
   
    
       
      
      
  .       


   

Alig confidence 









...
























.
























.














Template Conservation    
   
         





     
  
   
   .        
      
      
        
 
 

 


Template Sequence  LVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNR. RYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGG
Template Known Secondary structure 


S
.T


SS

STT



GGGS
Template Predicted Secondary structure 







.















Template SS confidence 















































































   493......500.........510.........520.........530 .........540.........550.........560.........570.
 
   568.570.........580.........590.........600.........610.........620.........630.........640.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  EGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVY
Query Conservation   




 
  

  
  


   





  



   
 
  
    
 

     
                
     
Alig confidence 















































































Template Conservation   



  
  

  
  


    

  
  
 

   
 




   



 
   
  
  
   
            
Template Sequence  CGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFS
Template Known Secondary structure  TT


TT
S

SSTTSSSTT

S
TTSTS



S
SSS


SS
Template Predicted Secondary structure 




























Template SS confidence 















































































   572.......580.........590.........600.........610.........620.........630.........640.........650.
 
   648.650....
Predicted Secondary structure 
Query SS confidence 






Query Sequence  NDLINYL
Query Conservation    
   
Alig confidence 






Template Conservation     
  
Template Sequence  LGELREL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   652......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions