Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence99.53%DateThu Jan 5 12:06:41 GMT 2012
Rank97Aligned Residues118
% Identity15%Templated1nkta4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   488.490.........500. ........510.........520.........530.........540.........550.........560.....
Predicted Secondary structure 
..




















Query SS confidence 













. .































































Query Sequence  DPRVEWLMGYLTSH. . RSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEI
Query Conservation    
   
   
   ..   




         
   
    
       
      
      
         


   
Alig confidence 













..
























.


























....






Template Conservation   

  


  
      







 

  

 

  
   .

   

       

  
      
 ....
 


  
Template Sequence  EAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKR. RIPHNVLNAKYHEQEATIIAVAGRRGG. . . . VTVATNM
Template Known Secondary structure  TT

S
T.T



SS
TTTSTT
....TT
Template Predicted Secondary structure 






.












....
Template SS confidence 















































































   413......420.........430.........440.........450... ......460.........470.........480 .......
 
   566...570... ......580.........590...
Predicted Secondary structure 




....................................................






Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















Query Sequence  GSEGRNFQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FASHMVMFDLPFNPDLLEQR
Query Conservation 

 




.................................................... 
  

  
  


   


Alig confidence 







....................................................



















Template Conservation 



 

 
                                               
   





      
 

  
 
Template Sequence  AGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRRIDNQL
Template Known Secondary structure 
STT



TT

TT

TTTSTTTTS
S

SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   488.490.........500.........510.........520.........530.........540.........550.........560.......
 
   594.....600.........610
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  IGRLDRIGQAHDIQIHV
Query Conservation 


  



   
 
  
Alig confidence 
















Template Conservation   

 



  
 
    
Template Sequence  RGRSGRQGDPGESRFYL
Template Known Secondary structure  TSSGGG

Template Predicted Secondary structure 






Template SS confidence 
















   568.570.........580....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions