 |
Job Description | P60240 | Confidence | 99.62% | Date | Thu Jan 5 12:06:41 GMT 2012 |
Rank | 92 | Aligned Residues | 129 |
% Identity | 21% | Template | d1gm5a4 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 3.24 |
|
 |
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | |
|
. | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | N | F | D | P | R | V | E | W | L | M | G | Y | L | T | S | H | . |
. |
R | S | Q | K | V | L | V | I | C | A | K | A | A | T | A | L | Q | L | E | Q | V | L | R | E | R | E | G | I | R | A | A | V | F | H | E | G | M | S | I | I | E | R | D | R | A | A | A | W | F | A | E | E | D | T | G | A | Q | V | L | L | C |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   | . |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . |
|
|
|   |
Template Sequence |   |
L | V | P | M | D | R | V | N | E | V | Y | E | F | V | R | Q | E | V | M | R | G | G | Q | A | F | I | V | Y | P | L | I | K | S | A | V | E | M | Y | E | Y | L | S | K | . |
E | V | F | K | L | G | L | M | H | G | R | L | S | Q | E | E | K | D | R | V | M | L | E | F | A | E | G | R | Y | D | . |
. |
I | L | V | S |
Template Known Secondary structure |   |
|
|
| S | S | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
| B |
|
| B |
|
|
|
|
|  |  |  |  |  |  |  | S | G | G | G | . | S |
|
|
| B |
|
|
|
| S | S | S |
|
| S |
| S |  |  |  |  |  |  |  | T | T | T | S | S | S | . | . | B |
|
|
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
558 | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | |
. | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | |
|
. | . | . | . |
  |
  |   |
563 | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | I | G | S | E | G | R | N | F | Q | F | A | S | H | M | V | M | F | D | L | P | F | . |
N | P | D | L | L | E | Q | R | I | G | R | L | D | R | I | G | Q | A | H | D | I | Q | I | H | V | P | Y | L | E | K | T | A | Q |
Query Conservation |   |
  |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |
| . |
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | T | V | I | E | V | G | I | D | V | P | R | A | N | V | M | V | I | E | N | P | E | R | F | G | L | A | Q | L | H | Q | L | R | G | R | V | G | R | G | G | Q | E | A | Y | C | . |
. |
F | L | V | V | G | D | V | G | E | E |
Template Known Secondary structure |   |
S | S |
|
|
| S |
| S |
|
| T | T |
|
|  |  |  | B |
| S |
| S | S | S |
| T | T |  |  |  |  |  |  |  | T | S |
|
| S | S | T | T |
|  |  | . | . |  |
|
|
|
| S |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
646 | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | |
|
. | . | . | . | . | . | . | . | . | 700 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|