Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence98.68%DateThu Jan 5 12:06:41 GMT 2012
Rank127Aligned Residues162
% Identity14%Templatec3llmB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.. .......210.........220.........230
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Query Sequence  LIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER. . . VLIIVPETLQHQWLVEMLRRFNLRFALF
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Template Sequence  VKKFESEILEAISQNSV. . VIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAF. . ERGEEP
Template Known Secondary structure  GGGG
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GGG
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   390.........400...... ...410.........420.........430.........440.........450......... 460.....
 
   231........240.........250.........260.........270.........280.........290.........300....... .
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Query Sequence  DDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP. . G
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Template Sequence  GKSCGYSVRFESILPRPHASIXFCTVGVLLRKLEA. . . . GIRGISHVIVDEIH. . . ERDINTDFLLVVLRDVVQAYPEVR
Template Known Secondary structure  TSSTT


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   466...470.........480.........490.........500 .........510.... .....520.........530........
 
   309310.........320......
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Query Sequence  VLLLTATPEQLGMESHFA
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Template Sequence  IVLXSATIDTSXFCEYFF
Template Known Secondary structure  SSS

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   539540.........550......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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