Job Description P60240 Confidence 99.12% Date Thu Jan 5 12:06:41 GMT 2012 Rank 108 Aligned Residues 168 % Identity 15% Template c3fe2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx5; PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp Resolution 2.60 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.														.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.														.	.	.	.
Query Sequence		S	L	I	P	H	Q	L	N	I	A	H	D	V	G	R	R	H	A	P	R	V	L	L	A	D	E	V	G	L	G	K	T	I	E	A	G	M	I	L	H	Q	Q	L	L	S	G	A	A	E	.	.	.	.	.	.	R	V	L	I	I	V	P	E	T	L	Q	H	Q	.	.	.	.	W	L	V	E	M	L	R	R
Query Conservation																																																			.	.	.	.	.	.														.	.	.	.
Alig confidence																	.	.																																	.	.	.	.	.	.														.	.	.	.
Template Conservation																	.	.
Template Sequence		E	P	T	A	I	Q	A	Q	G	W	P	V	A	L	S	.	.	G	L	D	M	V	G	V	A	Q	T	G	S	G	K	T	L	S	Y	L	L	P	A	I	V	H	I	N	H	Q	P	F	L	E	R	G	D	G	P	I	C	L	V	L	A	P	T	R	E	L	A	Q	Q	V	Q	Q	V	A	A	E	Y	C	R	A
Template Known Secondary structure		S														T	.	.	T									T	T	S																T	S					T	T				S						S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	R	F	A	L	F	D	D	E	R	Y	A	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	C	S	L	D	F	A	R	R	S	K	Q	R	L	E	H	L	C	E	A	E	W	D	L	L	V	V	D	E	A	H	H	L	V	W	S	E	D	A	P	S	R	E	Y	Q	A	I	E	Q	L
Query Conservation
Alig confidence																								.	.																.																												.	.
Template Conservation																								.	.																.																												.	.
Template Sequence		C	R	L	K	S	T	C	I	Y	G	G	A	P	K	G	P	Q	I	R	D	L	E	.	.	R	G	V	E	I	C	I	A	T	P	G	R	L	I	D	.	F	L	E	C	G	K	T	N	L	R	R	T	T	Y	L	V	L	D	E	A	D	R	M	L	D	M	G	.	.	F	E	P	Q	I	R	K	I	V	D	Q
Template Known Secondary structure		T	T								T	T	S											.	.	S			S												.				T	T	S				T	T							T	T							T	T	.	.											T
Template Predicted Secondary structure																								.	.																.																												.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	H	V	P	G	V	L	L	L	T	A	T	P	E	Q	L	G	M	E	S	H	F	A	R	L
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		I	R	P	D	R	Q	T	L	M	W	S	A	T	W	.	P	K	E	V	R	Q	L	A	E	D	F
Template Known Secondary structure		S		T	T								S			.
Template Predicted Secondary structure																.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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