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Job DescriptionP60240
Confidence96.40%DateThu Jan 5 12:06:41 GMT 2012
Rank148Aligned Residues141
% Identity14%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.... .....230.........240.........250.
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Query Sequence  VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN. LRFALFDDERYAEAQHDAYNPFDTEQL
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Template Sequence  IMFVGFNGSGKTTTIAKLANWLKNHG. . FSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAI. . . . .
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   126...130.........140.........150. ........160.........170.........180.........190........
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  VICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLL
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Template Sequence  . . . . . . . . . . . . . . . QHAKARGIDVVLIDTAGRSETNRNLMDE. MKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAV
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   199200.........210.........220...... ...230.........240.........250.........260..
 
   332....
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Query Sequence  DPNRF
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Template Sequence  KIDGI
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   263....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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