Job Description P60240 Confidence 26.34% Date Thu Jan 5 12:06:41 GMT 2012 Rank 323 Aligned Residues 93 % Identity 16% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.							.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	T	A	L	Q	L	E	Q	V	L	R	E	R	E	G	I	R	A	A	V	F	H	E	.	.	.	.	.	.	G	M	S	I	I	E	R	D	R	A	A	A	W	F	A	E	E	D	T	G	A	Q	V	L	L	C	S	E	I	G	S	E	G	R	N	F	Q	F	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.										.	.	.	.	.	.																										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																									.	.	.	.
Template Sequence		W	K	G	L	D	D	N	V	E	F	L	L	Q	N	.	G	I	E	V	I	V	P	N	G	N	T	G	E	F	Y	A	L	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R	A	T	V	V	.	.	.	.	A	G	I	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G
Template Known Secondary structure															T	.	T						T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S				.	.	.	.					S	S														T	T
Template Predicted Secondary structure																.																																									.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.			.	.	.	.	.	.	610
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		A	S	H	M	V	M	F	D	L	P	F	N	P	D	L	L	E	Q	R	I	G	R	L	D	R	I	G	Q	A	.	.	H	D	I	Q	I	H	V
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	F
Template Known Secondary structure			S										S																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions