Job Description P60240 Confidence 92.98% Date Thu Jan 5 12:06:41 GMT 2012 Rank 168 Aligned Residues 153 % Identity 13% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure															.	.																																												.
Query SS confidence															.	.																																												.
Query Sequence		N	I	A	H	D	V	G	R	R	H	A	P	R	.	.	V	L	L	A	D	E	V	G	L	G	K	T	I	E	A	G	M	I	L	H	Q	Q	L	L	S	G	A	A	E	R	V	L	I	I	V	P	E	T	L	Q	H	Q	W	.	L	V	E	M	L	R	R	F	N	L	R	F	A	L	F	D	D	E	R	Y	A
Query Conservation															.	.																																												.
Alig confidence															.	.																											.	.																.
Template Conservation																																											.	.
Template Sequence		T	E	L	D	R	M	T	Y	G	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	.	.	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D
Template Known Secondary structure									S	S	B		S	S									S	S	S	S															T	T	.	.								S	S	S														S									T	T	G	G	G
Template Predicted Secondary structure																																											.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
								237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																		.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	.	.	.	.	.	C	S	L	D	F	A	R	R	S	K	Q	R	L	E	H	L	C	E	A	E	W	D	L	L	V	V	D	E	A	H	H	L	V	W	S	E	D	A	.	.	.	.	.	.	P	S	R	E	Y	Q	A	I
Query Conservation		.	.	.	.	.	.																		.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L
Template Known Secondary structure		T			S														T	S								S	S		B															S		S	S									S	S	S	S	B		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	A	E	H	V	P	G	V	L	L	L	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	M	A	R	E	L	D	V	V	V	I	A	L	S
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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