Job Description P60240 Confidence 94.69% Date Thu Jan 5 12:06:41 GMT 2012 Rank 159 Aligned Residues 108 % Identity 18% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	G	K	T	I	E	A	G	M	I	L	H	Q	Q	L	L	S	G	A	A	E	R	V	L	I	I	V	P	E	T	L	Q	H	Q	W	L	V	E	M	L	R	R	F	N	L	R	F	A	L	F	D	D	E	R	Y	A	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	C	S	L	D	F
Query Conservation
Alig confidence																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	.	.	K	K	V	A	V	F	K	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	M	I	V	S	H	V	E	A	H	V	I	E	R	P	.
Template Known Secondary structure		T	T	S	S															T	T	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B						B					S	S	G	.
Template Predicted Secondary structure																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40																																	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		A	R	R	S	K	Q	R	L	E	H	L	C	E	A	E	W	D	L	L	V	V	D	E	A	H	H	L	V	W	S	E	D	A	P	S	R	E	Y	Q	A	I	E	Q	L	A	E	H	V	P	G	V	L	L	.	.	L	T	A	T	P	E	Q	L	G	M	E	S	H	F	A	R	L	R	L	L	D
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.																							.	.	.	.	.	.																					.	.
Template Conservation		.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	E	M	R	K	Y	I	E	E	D	T	R	G	V	F	I	D	E	V	Q	F	F	.	.	.	.	.	.	N	P	S	L	F	E	V	V	K	D	L	L	D	R	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T	A	L	L	L	S	L	A	D
Template Known Secondary structure		.	.	.	.	.	G	G	G	G	G	G			T	T									G	G	G	S	.	.	.	.	.	.		T	T											T	T									S	B		T	T	S		B												S
Template Predicted Secondary structure		.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
							67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions