Return to main results Retrieve Phyre Job Id

Job DescriptionP60240
Confidence72.05%DateThu Jan 5 12:06:41 GMT 2012
Rank200Aligned Residues152
% Identity14%Templatec2q6tB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.. .......180.........190.........200.........210.........220.... .....230.....
Predicted Secondary structure 




..














..




Query SS confidence 












. .



















































. .










Query Sequence  NIAHDVGRRHAPR. . VLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFN. . LRFALFDDERY
Query Conservation              
.. 











 
   
            


 
 

  

  
    
 ..           
Alig confidence 












..
























.

























..










Template Conservation    

   

   
 
  
 
 

 


     

   
  . 
  

  
 
        
                   
Template Sequence  KELDQLIGTLGPGSLNIIAARPAMGKTAFALTIAQNAALK. EGVGVGIYSLEMPAAQLTLRMMCSEARIDMNRVRLTDRD
Template Known Secondary structure 



TT

TTSS.S


SS
TT

GGGT


Template Predicted Secondary structure 











.















Template SS confidence 















































































   188.190.........200.........210.........220....... ..230.........240.........250.........260......
 
   236...240.........250.... .....260.........270.........280.........290. ........300........
Predicted Secondary structure 



.....













..


Query SS confidence 


















. . . . .




































. .
















Query Sequence  AEAQHDAYNPFDTEQLVIC. . . . . SLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDA. . PSREYQAIEQLAEHVPG
Query Conservation                  

 .....
   
         
    

 






 


    .. 
        
      
Alig confidence 


















.....






..



























..
















Template Conservation            
      
          
  .. 
          




 
              
   

 

     
Template Sequence  FSRLVDVASRLSEAPIYIDDTPDLTLMEVRA. . RARRLVSQNQVGLIIIDYLQLMSGPNRQQEIAAISRGLKALARELGI
Template Known Secondary structure  TT



TT
B..

GGG
B


TS
Template Predicted Secondary structure 







..











Template SS confidence 















































































   270.........280.........290.........300 .........310.........320.........330.........340.......
 
   309310....
Predicted Secondary structure 


Query SS confidence 





Query Sequence  VLLLTA
Query Conservation   




Alig confidence 





Template Conservation   

   
Template Sequence  PIIALS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   355....360
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions