Job Description P60240 Confidence 85.84% Date Thu Jan 5 12:06:41 GMT 2012 Rank 180 Aligned Residues 139 % Identity 16% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		G	L	G	K	T	I	E	A	G	M	I	L	H	Q	Q	L	L	S	G	A	A	E	R	V	L	I	I	V	.	.	P	E	T	L	Q	H	Q	W	L	V	E	M	L	R	R	F	N	L	R	F	A	L	F	D	D	E	R	Y	A	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	C	S	L	D
Query Conservation																														.	.
Alig confidence																					.	.								.	.
Template Conservation																					.	.
Template Sequence		G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	N	.	.	L	K	V	L	M	I	D	K	D	L	Q	A	T	L	T	K	D	L	A	K	T	F	K	V	E	L	P	R	V	N	F	Y	E	G	L	K	N	G	N	L	A	S	S	I	V	H	L	T	D	N	L	D	L	I	P	G	T	F	D
Template Known Secondary structure		S	S	S															T	T	.	.										T	T								T	T	T	S						S	S									T			G	G	G				S	S	S	S								G	G
Template Predicted Secondary structure																					.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		258	.	260	.	.	.															.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	R	R	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	L	E	H	L	C	E	A	E	W	D	L	L	V	V	D	E	A	H	H	L	V	W	S	E	D	A	P	S	R	E	Y	Q	A	I	E	Q	L	A	E	H	V	P	G	V	L	L	L	T	A	T	P	E	Q	L	G	M	E	S
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.											.	.	.	.	.
Template Sequence		L	M	L	L	P	K	L	T	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D	T	V	P	T	P	.	.	.	.	.	.	S	V	Y	T	N	N	A	I	V	A	.	.	.	.	.	S	D	Y	V	M	I	P	L	Q	A	E	E	E	S	T	N	N
Template Known Secondary structure		G	G	G					T	T	T	S							T							G	G	G	G	G	G		S								S	S		.	.	.	.	.	.	S										.	.	.	.	.		S								G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		324	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	A	R	L	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	N	Y	I	S	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions