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Job DescriptionP60240
Confidence99.98%DateThu Jan 5 12:06:41 GMT 2012
Rank17Aligned Residues212
% Identity11%Templatec1z5zB_
PDB info PDB header:hydrolase/recombinationChain: B: PDB Molecule:helicase of the snf2/rad54 family; PDBTitle: sulfolobus solfataricus swi2/snf2 atpase c-terminal domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   425....430.........440.........450.........460.........470.........480.........490.........500. .
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Query Sequence  VKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSH. . R
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Template Sequence  LTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLKGGEQSV. . . . . RRSGKMIRTMEIIEEALDE
Template Known Secondary structure 

TTTTT

TT
T




G.....GG
T
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   672.......680.........690.........700.........710.........720....... ..730.........740......
 
   503......510.........520.........530.........540.........550.........560.........570.........580..
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Query Sequence  SQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFD
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Template Sequence  GDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFD
Template Known Secondary structure  T

S






TTS

TT



TTB




TT
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S
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   747..750.........760.........770.........780.........790.........800.........810.........820......
 
   583......590.........600.........610.........620.........630.........640...... ...650.....
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Query Sequence  LPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSV. YNDLINYLA
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Template Sequence  RWWNP. . . . . . . . . . . . . . AVENVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSGDSWITELSTEELRKVIE
Template Known Secondary structure 

B
T..............T


TTSTTSTTTT

SSTTS
S
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   827..830. ........840.........850.........860.........870.........880......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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