Return to main results Retrieve Phyre Job Id

Job DescriptionP03024
Confidence85.34%DateThu Jan 5 10:57:56 GMT 2012
Rank412Aligned Residues29
% Identity7%Templated1ub9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40......
Predicted Secondary structure 













Query SS confidence 











































Query Sequence  TIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYH
Query Conservation 

 


  



  






    

  

 

   
  


 
Alig confidence 



















...............








Template Conservation 
  


  
 

   

  
...............  

  


Template Sequence  PFSQIQKVLDLTPGNLDSHI. . . . . . . . . . . . . . . RVLERNGLV
Template Known Secondary structure  TT

...............TTS
Template Predicted Secondary structure 



...............
Template SS confidence 











































   32.......40.........50. ........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions