Job Description P03024 Confidence 100.00% Date Thu Jan 5 10:57:56 GMT 2012 Rank 7 Aligned Residues 272 % Identity 28% Template c3kkeA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:laci family transcriptional regulator; PDBTitle: crystal structure of a laci family transcriptional regulator2 from mycobacterium smegmatis Resolution 2.20 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	L	V	V	G	D	V	S	D	P	F	F	G	A	M	V	K	A	V	E	Q	V	A	Y	H	T	G	N	F	L	L	I	G	N	G	Y	H	N	E	Q	K	E	R	Q	A	I	E	Q	L	I	R	H	R	C	A	A	L	V	V	H	A	K	M	I	P	D	A	D	L	A	S	L	M	K	Q	M	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	G	L	I	V	P	D	V	N	N	A	V	F	A	D	M	F	S	G	V	Q	M	A	A	S	G	H	S	T	D	V	L	L	G	Q	I	D	A	P	P	R	G	T	Q	Q	L	S	R	L	V	S	E	G	R	V	D	G	V	L	L	Q	R	R	E	D	F	D	D	D	M	L	A	A	V	L	E	G	V	P
Template Known Secondary structure								S		T	T	S	T	T															T	T										S	T	T												S		S	S	S								T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	L	I	N	R	I	L	P	G	F	E	N	R	C	I	A	L	D	D	R	Y	G	A	W	L	A	T	R	H	L	I	Q	Q	G	H	T	R	I	G	Y	L	C	S	N	H	S	I	S	D	A	E	D	R	L	Q	G	Y	Y	D	A	L	A	E	S	G	I	A	A	N	D	R	L	V	T	F	G	E	P	D
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	V	T	I	N	S	R	V	P	G	.	R	V	G	S	V	I	L	D	D	Q	K	G	G	G	I	A	T	E	H	L	I	T	L	G	H	S	R	I	A	F	I	S	G	T	A	I	H	D	T	A	Q	R	R	K	E	G	Y	L	E	T	L	A	S	A	G	L	R	S	E	A	A	W	V	V	D	A	G	W	E
Template Known Secondary structure						S				T	T	.																							T	T			S						S		S	S																		T	T					G	G	G						S	S
Template Predicted Secondary structure												.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		221	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		E	S	G	G	E	Q	A	M	T	E	L	.	.	.	.	.	L	G	R	G	R	N	F	T	A	V	A	C	Y	N	D	S	M	A	A	G	A	M	G	V	L	N	D	N	G	I	D	V	P	G	E	I	S	L	I	G	F	D	D	V	L	V	S	R	Y	V	R	P	R	L	T	T	V	R	Y	P	I	V	T	M
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		A	D	A	G	S	A	A	L	N	T	L	Y	R	G	A	N	L	G	K	P	D	G	P	T	A	V	V	V	A	S	V	N	A	A	V	G	A	L	S	T	A	L	R	L	G	L	R	V	P	E	D	L	S	I	V	G	I	N	T	T	W	V	S	D	T	V	Y	P	A	L	T	T	V	R	L	P	L	Q	R	L
Template Known Secondary structure																		T	T	S	T	T	S		S					S	S														T	T			T	T	T	T							S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	T	Q	A	A	E	L	A	L	A	L	A	D	N	R	P	L	P	E	I	T	N	.	V	F	S	P	T	L	V	R	R	H	S	V	S	T	P	S
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		G	E	V	A	A	D	V	L	M	E	H	L	G	G	R	A	L	T	D	T	V	V	T	Q	P	T	P	E	L	L	V	R	E	T	T	A	P	P	T
Template Known Secondary structure														T	T										S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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