Job Description P03024 Confidence 99.89% Date Thu Jan 5 10:57:56 GMT 2012 Rank 60 Aligned Residues 253 % Identity 17% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

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		61	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.
Predicted Secondary structure									.																																																																	.	.	.
Query SS confidence									.																																																																	.	.	.
Query Sequence		T	V	G	L	V	V	G	.	D	V	S	D	P	F	F	G	A	M	V	K	A	V	E	Q	V	A	Y	H	T	G	N	F	L	L	I	G	N	G	Y	H	N	E	Q	K	E	R	Q	A	I	E	Q	L	I	R	H	R	C	A	A	L	V	V	H	A	K	M	I	P	D	A	D	L	.	.	.	A	S	L	M	K
Query Conservation									.																																																																	.	.	.
Alig confidence									.																																																																	.	.	.
Template Conservation
Template Sequence		S	V	V	F	L	N	P	G	N	S	T	E	T	F	W	V	S	Y	S	Q	F	X	Q	A	A	A	R	D	L	G	L	D	L	R	I	L	Y	A	E	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	V	N	E	Q	Y	V	A	P	Q	I	L	R	L	S	Q	G
Template Known Secondary structure									S		T	T																			T									T	T															S	S	S			S								S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																										.	.	.	.	.	.	.
Query SS confidence																		.	.																										.	.	.	.	.	.	.
Query Sequence		Q	M	P	G	M	V	L	I	N	R	I	L	P	G	F	E	.	.	N	R	C	I	A	L	D	D	R	Y	G	A	W	L	A	T	R	H	L	I	Q	Q	G	H	T	.	.	.	.	.	.	.	R	I	G	Y	L	C	S	N	H	S	I	S	D	A	E	D	R	L	Q	G	Y	Y	D	A	L	A	E	S	G	I
Query Conservation																		.	.																										.	.	.	.	.	.	.
Alig confidence																		.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	I	K	L	F	I	V	N	S	P	L	T	L	D	Q	R	W	I	G	S	X	V	G	D	D	E	E	A	G	Y	R	X	L	K	E	L	L	H	K	L	G	P	V	P	A	G	H	G	I	E	L	L	A	F	S	G	L	K	V	T	P	A	A	Q	L	R	E	R	G	L	R	R	A	L	A	E	H	P	Q
Template Known Secondary structure		S									S				T	T	T																														S	S										S		T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		A	A	N	D	R	L	V	T	F	G	E	P	D	E	S	G	G	E	Q	A	M	T	E	L	L	G	R	G	R	N	F	T	A	V	A	C	Y	N	D	S	M	A	A	G	A	M	G	V	L	N	D	N	G	I	D	V	P	G	E	I	S	L	I	G	F	D	D	V	L	.	.	V	S	R	Y	V	R	P	R	L
Query Conservation																																																																							.	.
Alig confidence			.																																																																				.	.
Template Conservation			.
Template Sequence		V	.	H	L	R	Q	L	V	Y	G	E	W	N	R	E	R	A	Y	R	Q	A	Q	Q	L	L	K	R	Y	P	K	T	Q	L	V	W	S	A	N	D	E	X	A	L	G	A	X	Q	A	A	R	E	L	G	R	K	P	G	T	D	L	L	F	S	G	V	N	S	S	P	E	A	L	Q	A	L	I	D	G	K	L
Template Known Secondary structure			.									T	T																	T	T							S	S														T	T			B	T	T	T	B						S												T	S	S
Template Predicted Secondary structure			.
Template SS confidence
		213		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	V	R	Y	P	I	V	T	M	A	T	Q	A	A	E	L	A	L	A	L	A	D	N	R	P	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	L	E	A	G	H	F	T	L	G	G	W	A	L	V	A	L	H	D	D	A	L	G	L	D	A	R	R
Template Known Secondary structure								G	G	G														T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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