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Job DescriptionP03024
Confidence100.00%DateThu Jan 5 10:57:56 GMT 2012
Rank33Aligned Residues267
% Identity16%Templatec3g85A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator (laci family); PDBTitle: crystal structure of laci family transcription regulator from2 clostridium acetobutylicum
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TETVGLVVG. DVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQ
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Template Sequence  KPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIANISNYDLEYLNKASL
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TTS
GGGTTT
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  MPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFG
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Template Sequence  TLPIILFNR. . LSNKYSSVNVDNYKXGEKASLLFAKKRYKSAAAILTESLNDAXDNRNKGFIETCHKNGIKISENHIIAA
Template Known Secondary structure  SS
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   145....150... ......160.........170.........180.........190.........200.........210.........220..
 
   218.220.........230.........240.........250.........260.........270.. .......280.........290.....
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Query Sequence  EPDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGF. . DDVLVSRYVRPRLTTVRYPIVTM
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Template Sequence  ENSIHGGVDAAKKLXKLKNTPKALFCNSDSIALGVISVLNKRQISIPDDIEIVAIGXNDREYTEFSTPPVTIVDIPIEEX
Template Known Secondary structure 
SSTTSSS

SSSTT

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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   296...300.........310.........320.......
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Query Sequence  ATQAAELALALADNRPLPEITNVFSPTLVRRH
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Template Sequence  AGTCISLVEKLINRDIENPTSILFDGPLILRN
Template Known Secondary structure  TTSS
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   303......310.........320.........330....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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