Job Description P03024 Confidence 100.00% Date Thu Jan 5 10:57:56 GMT 2012 Rank 26 Aligned Residues 266 % Identity 19% Template c3cs3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis Resolution 2.40 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	T	T	E	T	V	G	L	V	V	G	D	V	S	D	P	F	F	G	A	M	V	K	A	V	E	Q	V	A	Y	H	T	G	N	F	L	L	I	G	N	G	Y	H	N	E	Q	K	E	R	Q	A	I	E	Q	L	I	R	H	R	C	A	A	L	V	V	H	A	K	M	I	P	D	A	D	L	A	S	L
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		K	R	R	Q	T	N	I	I	G	V	Y	L	A	D	Y	G	G	S	F	Y	G	E	L	L	E	G	I	K	K	G	L	A	L	F	D	Y	E	M	I	V	C	S	G	K	K	S	.	.	.	.	.	.	.	H	L	F	I	P	E	K	M	V	D	G	A	I	I	L	D	W	T	F	P	T	K	E	I	E	K	F
Template Known Secondary structure															S	S		T	T	T														T	T	T								S	T	T	T	.	.	.	.	.	.	.	T	T				T	T	T		S							T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	M	P	G	M	V	L	I	N	R	I	L	P	G	F	E	N	R	C	I	A	L	D	D	R	Y	G	A	W	L	A	T	R	H	L	I	Q	Q	G	H	T	R	I	G	Y	L	C	S	N	H	S	I	S	D	A	E	D	R	L	Q	G	Y	Y	D	A	L	A	E	S	G	I	A	A	N	D	R	L	V
Query Conservation
Alig confidence																																																																													.	.
Template Conservation																																																																													.	.
Template Sequence		A	E	R	G	H	S	I	V	V	L	D	R	T	T	E	H	R	N	I	R	Q	V	L	L	D	N	R	G	G	A	T	Q	A	I	E	Q	F	V	N	V	G	S	K	K	V	L	L	L	S	G	P	E	K	G	Y	D	S	Q	E	R	L	A	V	S	T	R	E	L	T	R	F	G	I	P	Y	.	.	E	I	I
Template Known Secondary structure				T	T						S	S	S				S	T	T																						T	T		S									T	T	S																	T	T				.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	G	E	P	D	E	S	G	G	E	Q	A	M	T	E	L	L	G	R	G	R	N	F	T	A	V	A	C	Y	N	D	S	M	A	A	G	A	M	G	V	L	N	D	N	G	I	D	V	P	G	E	I	S	L	I	G	F	D	D	V	L	V	S	R	Y	V	R	P	R	L	T	T	V	R	Y	P	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	D	F	T	E	P	S	G	Y	A	A	A	K	K	I	L	S	Q	P	Q	T	E	P	V	D	V	F	A	F	N	D	E	M	A	I	G	V	Y	K	Y	V	A	E	T	N	Y	Q	M	G	K	D	I	R	I	I	G	F	D	N	S	E	L	G	A	F	V	Q	P	R	L	A	T	I	A	Y	S	K	H	R
Template Known Secondary structure					S	S												T	T	S				S	S						S	S												T	T	S	S			B	T	T	T						S	S								S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	Q	A	A	E	L	A	L	A	L	A	D	N	R	P	L	P	E	I	T	N	V	F	S	P	T	L	V	R	R	H	S	V	S	T
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		W	G	M	V	A	A	E	K	I	I	H	L	M	R	G	E	A	A	E	S	E	H	.	.	I	Y	T	R	F	I	E	G	E	S	F	P	S
Template Known Secondary structure															T	T								.	.									T	T	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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