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Job DescriptionP03024
Confidence100.00%DateThu Jan 5 10:57:56 GMT 2012
Rank10Aligned Residues273
% Identity18%Templatec2iksA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-binding transcriptional dual regulator; PDBTitle: crystal structure of n-terminal truncated dna-binding transcriptional2 dual regulator from escherichia coli k12
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.........110.........120........ .130.....
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Query Sequence  QTTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVHAKMIPD. ADLASLM
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Template Sequence  GRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEXRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWA
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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  KQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVT
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Template Sequence  NDPFPIVALDRALDREHFTSVVGADQDDAEXLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPRE. . VHFLY
Template Known Secondary structure  TSSS
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   139140.........150.........160.........170.........180.........190.........200.........210. .....
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  FGEPDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTM
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Template Sequence  ANSYEREAAAQLFEKWLETHPXPQALFTTSFALLQGVXDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDV
Template Known Secondary structure  SSS
TTTS


SSSSS

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   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   296...300.........310... ......320.........330.
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Query Sequence  ATQAAELALALADNRPLP. EITNVFSPTLVRRHSVST
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Template Sequence  AERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSR
Template Known Secondary structure  SSS





GGGG
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   297..300.........310.........320.........330...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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