 |
Job Description | P03024 | Confidence | 96.43% | Date | Thu Jan 5 10:57:56 GMT 2012 |
Rank | 83 | Aligned Residues | 37 |
% Identity | 27% | Template | c2ebyA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; |
PDBTitle: crystal structure of a hypothetical protein from e. coli
|
Resolution | 2.25 Å |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | K | D | V | A | R | L | A | G | V | S | V | A | T | V | S | R | V | I | N | N | S | P | K | A | S | E | A | S | R | L | A | V | H | S | A |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
Template Sequence |   |
K | I | N | E | L | A | E | L | L | H | V | H | R | N | S | V | S | A | L | I | N | N | N | R | K | L | T | T | E | M | A | F | R | L | A | K | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  | T | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|