Emaill.a.kelley@imperial.ac.uk
DescriptionP0AEH5
DateThu Jan 5 11:23:22 GMT 2012
Unique Job IDd37ddbbf6d59c2e5

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1nfoA_



90.9 12 PDB header:lipid transport
Chain: A: PDB Molecule:apolipoprotein e2;
PDBTitle: apolipoprotein e2 (apoe2, d154a mutation)
2d1gs9a_



86.5 11 Fold:Four-helical up-and-down bundle
Superfamily:Apolipoprotein
Family:Apolipoprotein
3c3kdpH_



73.7 27 PDB header:hydrolase
Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
4c3kdpG_



73.7 27 PDB header:hydrolase
Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
5c2x43S_



65.8 10 PDB header:membrane protein
Chain: S: PDB Molecule:sherp;
PDBTitle: structural basis of molecular recognition by sherp at membrane2 surfaces
6c3r2pA_



52.3 8 PDB header:lipid transport
Chain: A: PDB Molecule:apolipoprotein a-i;
PDBTitle: 2.2 angstrom crystal structure of c terminal truncated human2 apolipoprotein a-i reveals the assembly of hdl by dimerization.
7c2vs0B_



42.6 11 PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
8d1wa8b1



40.8 10 Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
9c2a01B_



39.6 18 PDB header:lipid transport
Chain: B: PDB Molecule:apolipoprotein a-i;
PDBTitle: crystal structure of lipid-free human apolipoprotein a-i
10c3gvmA_



39.2 6 PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
11d1eq1a_



29.7 14 Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
12d1wa8a1



25.2 11 Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
13c2jwaA_



21.9 36 PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
14c3onjA_



21.8 11 PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
15c1av1B_



21.8 7 PDB header:lipid transport
Chain: B: PDB Molecule:apolipoprotein a-i;
PDBTitle: crystal structure of human apolipoprotein a-i
16c1p58F_



21.4 18 PDB header:virus
Chain: F: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
17d1f16a_



21.3 21 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
18c3lw5K_



20.0 44 PDB header:photosynthesis
Chain: K: PDB Molecule:photosystem i reaction center subunit x psak;
PDBTitle: improved model of plant photosystem i
19c3e0sA_



18.5 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from2 chlorobium tepidum
20c2l5bA_



16.5 33 PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
21d1nekd_



not modelled 16.2 15 Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
22d1l2pa_



not modelled 15.5 16 Fold:Single transmembrane helix
Superfamily:F1F0 ATP synthase subunit B, membrane domain
Family:F1F0 ATP synthase subunit B, membrane domain
23d1vcsa1



not modelled 13.9 7 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
24d1i6la_



not modelled 13.8 4 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain
25c2v8sV_



not modelled 12.3 10 PDB header:protein transport
Chain: V: PDB Molecule:vesicle transport through interaction with
PDBTitle: vti1b habc domain - epsinr enth domain complex
26c2kncB_



not modelled 12.3 15 PDB header:cell adhesion
Chain: B: PDB Molecule:integrin beta-3;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
27c2p2uA_



not modelled 12.2 24 PDB header:dna binding protein
Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative;
PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris
28c3m91B_



not modelled 10.7 17 PDB header:hydrolase regulator
Chain: B: PDB Molecule:prokaryotic ubiquitin-like protein pup;
PDBTitle: crystal structure of the prokaryotic ubiquitin-like protein (pup)2 complexed with the amino terminal coiled coil of the mycobacterium3 tuberculosis proteasomal atpase mpa
29d1fioa_



not modelled 10.2 14 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
30d1ryka_



not modelled 10.1 9 Fold:SAM domain-like
Superfamily:Hypothetical protein YjbJ
Family:Hypothetical protein YjbJ
31c2ww9B_



not modelled 8.9 14 PDB header:ribosome
Chain: B: PDB Molecule:protein transport protein sss1;
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
32d1s35a1



not modelled 8.8 9 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
33c2j5dA_



not modelled 8.4 16 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
34d1eiya1



not modelled 8.3 21 Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Phenylalanyl-tRNA synthetase (PheRS)
35d1c99a_



not modelled 7.4 28 Fold:Transmembrane helix hairpin
Superfamily:F1F0 ATP synthase subunit C
Family:F1F0 ATP synthase subunit C
36d1q2ha_



not modelled 7.1 10 Fold:Dimerisation interlock
Superfamily:Phenylalanine zipper
Family:Adapter protein APS, dimerisation domain
37c2kp6A_



not modelled 6.9 8 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of protein cv0237 from2 chromobacterium violaceum. northeast structural genomics3 consortium (nesg) target cvt1
38c1n54A_



not modelled 6.7 9 PDB header:rna binding protein
Chain: A: PDB Molecule:80 kda nuclear cap binding protein;
PDBTitle: cap binding complex m7gpppg free
39c3a0hX_



not modelled 6.7 44 PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of i-substituted photosystem ii complex
40c3a0bX_



not modelled 6.7 44 PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of br-substituted photosystem ii complex
41c3a0hx_



not modelled 6.7 44 PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of i-substituted photosystem ii complex
42c3a0bx_



not modelled 6.7 44 PDB header:electron transport
Chain: X: PDB Molecule:photosystem ii reaction center protein x;
PDBTitle: crystal structure of br-substituted photosystem ii complex
43c3ipdB_



not modelled 6.5 11 PDB header:exocytosis
Chain: B: PDB Molecule:syntaxin-1a;
PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
44c3prhB_



not modelled 6.5 9 PDB header:ligase
Chain: B: PDB Molecule:tryptophanyl-trna synthetase;
PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis
45c2kbvA_



not modelled 6.4 20 PDB header:membrane protein
Chain: A: PDB Molecule:sodium/hydrogen exchanger 1;
PDBTitle: structural and functional analysis of tm xi of the nhe12 isoform of the na+/h+ exchanger
46d1lvfa_



not modelled 6.3 8 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
47c3sz3A_



not modelled 6.1 12 PDB header:ligase
Chain: A: PDB Molecule:tryptophanyl-trna synthetase;
PDBTitle: crystal structure of tryptophanyl-trna synthetase from vibrio cholerae2 with an endogenous tryptophan
48c2ka1B_



not modelled 6.1 16 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
49c2ka2A_



not modelled 6.1 16 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
50c1s5lx_



not modelled 6.0 44 PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem ii psbx protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
51d1dqna_



not modelled 5.8 16 Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
52c2ka1A_



not modelled 5.7 13 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
53c2ka2B_



not modelled 5.7 13 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
54d1rhzb_



not modelled 5.7 21 Fold:Single transmembrane helix
Superfamily:Preprotein translocase SecE subunit
Family:Preprotein translocase SecE subunit
55c1q90L_



not modelled 5.6 33 PDB header:photosynthesis
Chain: L: PDB Molecule:cytochrome b6f complex subunit petl;
PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
56d1q90l_



not modelled 5.6 33 Fold:Single transmembrane helix
Superfamily:PetL subunit of the cytochrome b6f complex
Family:PetL subunit of the cytochrome b6f complex
57c3hd7A_



not modelled 5.4 15 PDB header:exocytosis
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
58d1t72a_



not modelled 5.4 13 Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
59c3py7A_



not modelled 5.4 18 PDB header:viral protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,paxillin ld1,protein e6
PDBTitle: crystal structure of full-length bovine papillomavirus oncoprotein e62 in complex with ld1 motif of paxillin at 2.3a resolution