Job Description P77218 Confidence 100.00% Date Thu Jan 5 12:26:31 GMT 2012 Rank 8 Aligned Residues 275 % Identity 21% Template d1vi1a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.95

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		15	.	.	.	.		20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.						.	.	.														.
Query SS confidence							.						.	.	.														.
Query Sequence		A	R	V	V	F	.	P	D	A	L	D	.	.	.	Q	R	V	L	K	A	A	Q	Y	L	H	Q	Q	.	G	L	A	T	P	I	L	V	A	N	P	F	E	L	R	Q	F	A	L	S	H	G	V	A	M	D	G	L	Q	V	I	D	P	H	G	N	L	A	M	R	E	E	F	A	H	R	W	L	A	R	A	G
Query Conservation							.						.	.	.														.
Alig confidence							.						.	.	.														.																							.	.	.																											.
Template Conservation																																																				.	.	.																											.
Template Sequence		L	R	I	A	V	D	A	X	G	G	D	H	A	P	K	A	V	I	D	G	V	I	K	G	I	E	A	F	D	D	L	H	I	T	L	V	G	D	K	T	T	I	E	S	H	L	T	T	T	S	.	.	.	D	R	I	T	V	L	H	A	D	E	V	I	E	P	T	D	E	P	V	R	A	V	R	R	K	K	.
Template Known Secondary structure								S	S		S	S	S	T	T															T	T														T	T			S			.	.	.	T	T								B				T	T	S										T	.
Template Predicted Secondary structure																																																				.	.	.																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	P	P	D	A	L	E	K	L	T	D	P	L	M	F	A	A	A	M	V	S	A	G	K	A	D	V	C	I	A	G	N	L	S	S	T	A	N	V	L	R	A	G	L	R	I	I	G	L	Q	P	G	C	K	T	L	S	S	I	F	L	M	L	P	Q	Y	S	G	P	A	L	G	F	A	D	C	S	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																						.	.																															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																						.	.																															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	N	S	S	X	V	L	X	A	Q	E	V	A	E	N	R	A	D	A	C	I	S	.	.	A	G	N	T	G	A	L	X	T	A	G	L	F	I	V	G	R	I	K	G	I	D	R	P	A	L	A	P	T	L	.	P	T	V	S	G	D	G	F	L	L	L	D	V	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	B											T	T	S		S					.	.		S												T	T		B		T	T		S	S								.			S	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																						.	.																															.
Template SS confidence
													77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	P	Q	P	T	A	A	Q	L	A	D	I	A	L	A	S	A	E	T	W	R	A	.	I	T	G	E	E	P	R	V	A	M	L	S	F	S	S	N	G	S	A	R	H	P	C	V	A	N	V	Q	Q	A	T	E	I	V	R	E	R	A	P	K	L	V	V	D	G	E	L	Q	F	D	A	A	F	V	P	E	V
Query Conservation																								.
Alig confidence																								.													.	.	.																							.											.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.																							.											.	.	.	.	.	.	.	.	.
Template Sequence		N	V	D	A	K	P	E	H	L	V	Q	Y	A	I	X	G	S	V	Y	S	Q	Q	V	R	G	V	T	S	P	R	V	G	L	L	N	.	.	.	V	G	T	E	D	K	K	G	N	E	L	T	K	Q	T	F	Q	I	L	K	E	T	.	A	N	I	N	F	I	G	N	V	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S																				T	S			S	S								.	.	.	S	S	S	S	T	T		S													S		.	T	T	S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.																							.											.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																														.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	Q	K	A	P	A	S	P	L	Q	G	K	A	N	V	M	V	F	P	S	L	E	A	G	N	I	G	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	Q	R	L	G	G	Y	R	A	V	G	P	L	I	Q	G	L	A	A	P
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.												.
Template Sequence		.	.	.	.	.	A	R	D	L	L	D	D	V	A	D	V	.	V	V	T	D	G	F	T	G	N	V	T	L	K	T	L	E	G	S	A	L	S	I	F	K	X	X	R	D	V	X	T	S	T	L	V	L	K	P	K	L	K	E	X	K	X	K	X	E	Y	S	N	Y	G	G	A	S	L	F	G	L	K	A	P
Template Known Secondary structure		.	.	.	.	.	G	G	G	G	G	G	T	S		S		.																															T	T	T																G	G	G	S							T	B	S	S
Template Predicted Secondary structure		.	.	.	.	.												.
Template SS confidence
							210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	D	L	S	R	G	C	S	V	Q	E	I	I	E	L	A	L	V	A	A	V	P	R	Q	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	K	A	H	G	S	S	D	S	N	A	V	F	R	A	I	R	Q	A	R	E	X	V	S	Q	N
Template Known Secondary structure							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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